Transcript Information: R_Transcript_42808.p1


Annotated TAIR IDAT4G16830.1
Annotated Gene NameHyaluronan / mRNA binding family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9470621-9472308 | Forward length=355
E-Value5E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1639.35925560227
Replicate 2540.72743759092
Replicate 3592.14868489555
Condition 2: 8 Hour
Replicate 1570.56813278733
Replicate 2618.67171143978
Replicate 3602.47257189329
Condition 3: 24 Hour
Replicate 1715.1261558879
Replicate 2608.44410884005
Replicate 3656.3886175633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42808.p1 GENE.R_Transcript_42808~~R_Transcript_42808.p1 ORF type:complete len:361 (+),score=151.95,HABP4_PAI-RBP1|PF04774.11|5.4e+03,HABP4_PAI-RBP1|PF04774.11|1.5e+04,HABP4_PAI-RBP1|PF04774.11|2.3e-28,HABP4_PAI-RBP1|PF04774.11|4.3e+02,Stm1_N|PF09598.6|6e-17,Stm1_N|PF09598.6|1.6e+04,Stm1_N|PF09598.6|1.6e+04,Stm1_N|PF09598.6|2.2e+03,Stm1_N|PF09598.6|51 R_Transcript_42808:335-1417(+)
ATGGCAACCACAAACCCATTCGAGTTGTTAGGTGAAGGAGAAGCAGAGGATCCAAGCCTCTTTATCGCTGCTCAAGAGCAAAAGGCTGCTGCTCCTACCAAAAAGGCCCCTGCTGCTAACAACGCCGTTGCTAAGCCTGCTGCTAAGCTTCCTACCAAGCCTCTCCCTCCTTCTCAAGCTGTTAGAGAGGGAAGGAATGAAGCTGGCCGTGGTGGAGGTGGCCGCGGTGGTCGTGGGTATGGGCGTGGACGTGGTCCAGGTGGAGCTAACAGAGATTTAGCCAACAATGATGGCACATTTGCCAATGAAAATGGAGGTCCAATGGGATTCAAGGAAGATAGGGAGAAGCCCTATGAGAGACGTGGTGGATATGCTGGTCCACGTGGTGGTTTCCGTGGAGGACGACGTGGAGGTTTCAGCAATGGTGATGCTGCTGAGGGTGAACGACCAAGGAGGGTCTTTGAACGCCGCAGTGGCACTGGACGTGGAAATGAGGTGAAACGTGAAGGTTCTGGTCGTGGAAATTGGGGAACTACTACTGATGAGATTACCGCAGACACTGAAGAACCCGTTGCAGAGAATGAGGTAAATGTTAATGCTGAGAAGCCGGCAGGAGAAGGTGAAAATGTTGAGGCTGAAAAAGAGAATCCTGTGGAGGAGAAACAAGAAGAGGAGCCAGAAGAGAAGCAAATGACTCTTGAGGAGTATGAGAAGGTGCTGGAGGAGAAGAGGAAGGCTTTGTTGTCATTGAAGAGTGAGGAGAGGAAGGTTGATGTGGACAAGGAATTTGAATCTATGCAGCTAGTATCCAAGAAGAAGAATGAGGAAGAGGTCTTCATTAAACTGGGTTCTGACAAGGACAAGAGAAAAGAAGCTGCTGAAAAAGAAGAGAGAGCTAAGAAGTCTGTGAGCATAAACGAGTTTCTTAAGCCTGCTGATGGAGAGACGTACTACAGACCTGGTGGACGTGGTAGGGGAAGAGGCCGTGGAAGAGGAGGGTATGGTGGAGGCTATGCTGCAAACAATGTGCCTGCTCCTTCAATTCAAGATGCCTATGAGTTTCCATCATTGGGGGCGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42808.p1 GENE.R_Transcript_42808~~R_Transcript_42808.p1 ORF type:complete len:361 (+),score=151.95,HABP4_PAI-RBP1|PF04774.11|5.4e+03,HABP4_PAI-RBP1|PF04774.11|1.5e+04,HABP4_PAI-RBP1|PF04774.11|2.3e-28,HABP4_PAI-RBP1|PF04774.11|4.3e+02,Stm1_N|PF09598.6|6e-17,Stm1_N|PF09598.6|1.6e+04,Stm1_N|PF09598.6|1.6e+04,Stm1_N|PF09598.6|2.2e+03,Stm1_N|PF09598.6|51 R_Transcript_42808:335-1417(+)
MATTNPFELLGEGEAEDPSLFIAAQEQKAAAPTKKAPAANNAVAKPAAKLPTKPLPPSQAVREGRNEAGRGGGGRGGRGYGRGRGPGGANRDLANNDGTFANENGGPMGFKEDREKPYERRGGYAGPRGGFRGGRRGGFSNGDAAEGERPRRVFERRSGTGRGNEVKREGSGRGNWGTTTDEITADTEEPVAENEVNVNAEKPAGEGENVEAEKENPVEEKQEEEPEEKQMTLEEYEKVLEEKRKALLSLKSEERKVDVDKEFESMQLVSKKKNEEEVFIKLGSDKDKRKEAAEKEERAKKSVSINEFLKPADGETYYRPGGRGRGRGRGRGGYGGGYAANNVPAPSIQDAYEFPSLGAK*

Click here to download the sequence:
Link to NCBI Protein BLAST