Transcript Information: R_Transcript_428196.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.090810751018501
Replicate 20.10445920605123
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.090306520499438
Condition 3: 24 Hour
Replicate 10.11421794640649
Replicate 20
Replicate 30.10889405316864


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_428196.p1 GENE.R_Transcript_428196~~R_Transcript_428196.p1 ORF type:3prime_partial len:201 (+),score=22.65,RVT_1|PF00078.23|8e-26 R_Transcript_428196:1-600(+)
ATGCATGTTATGAAGAAGAGTAAGAGTAAAGAAGGCCTCATGGCCATCAAGATTGATATGGCTAAAGCCTATGATAAGGTAGAGTGGGGTTTTATTTTACATATTCTCAAATGCTTGGGATTCTCTGACAAATTTGTGAATCTTATTTCCCAGTGTATTTCAACTCCATCTTTCTCCTTTCTACTTAATGGGAGGCCGTTTGGTTTAATCAAACCTTCTCGAGGAATTAGACAGGGAGACCCCCTCTCCCCCTTCTTATTTGTATTGGTTATGGAAACCATATCTAGAATGAGTAATAAGTACCAGGAGGCAGGAGAGCTAAGAGGTATTTCTATTGGCATAGACTGTTCTTGTATTACTCATCTAATGTATGCTAATGATCTTGTAATGTTTGCTAGAGCTACTGAATCTAATGCTACTTGTATTAAGAAGATTTTGCTGCAAATGGAGGTTTGGAGTGGTCTAGCTGCAAACTGCCAGAAGTCAGGGGTATACTTCAGTAAGTGCACTAAGCCACAAAATAAAAGAAAGGTGAAGGGGCAGCTGCACTTTAACAAGATGGACAGGAATTCCATTTATTTGGGGTTACCTATGTTTCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_428196.p1 GENE.R_Transcript_428196~~R_Transcript_428196.p1 ORF type:3prime_partial len:201 (+),score=22.65,RVT_1|PF00078.23|8e-26 R_Transcript_428196:1-600(+)
MHVMKKSKSKEGLMAIKIDMAKAYDKVEWGFILHILKCLGFSDKFVNLISQCISTPSFSFLLNGRPFGLIKPSRGIRQGDPLSPFLFVLVMETISRMSNKYQEAGELRGISIGIDCSCITHLMYANDLVMFARATESNATCIKKILLQMEVWSGLAANCQKSGVYFSKCTKPQNKRKVKGQLHFNKMDRNSIYLGLPMFR

Click here to download the sequence:
Link to NCBI Protein BLAST