Transcript Information: R_Transcript_42837.p1


Annotated TAIR IDAT5G43010.1
Annotated Gene Nameregulatory particle triple-A ATPase 4A
Annotated Gene Symbol(s)RPT4A
Annotation TypeOrtholog
Chromosome Positionchr5:17248563-17251014 | Reverse length=399
E-Value7.7E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1158.31462617007
Replicate 2130.19816439051
Replicate 3155.33991148748
Condition 2: 8 Hour
Replicate 1125.32087160186
Replicate 2144.89626700607
Replicate 3171.16330316159
Condition 3: 24 Hour
Replicate 1186.08514099642
Replicate 2169.34892253669
Replicate 3174.05674707043


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42837.p1 GENE.R_Transcript_42837~~R_Transcript_42837.p1 ORF type:complete len:398 (+),score=87.38,AAA|PF00004.25|4e-42,AAA_16|PF13191.2|0.00015,AAA_16|PF13191.2|45,AAA_5|PF07728.10|4.3e+02,AAA_5|PF07728.10|0.00011,RuvB_N|PF05496.8|7.1e-06,AAA_2|PF07724.10|4.3e+03,AAA_2|PF07724.10|1.6e-05 R_Transcript_42837:94-1287(+)
ATGGCGACGGAAGAGGATGTACGACGTCGTACGGCGATAGCCGACTATCGCAAGAAGCTACTTCAGCATCGCGAACTCGAATCCAGAAATCGCAAAGTGAAGGAGGAACTGCGAGCTGCTAAAAAAGAGTTTGGTAAGACAGAGGACGACTTGAAGTCCCTGCAGAGCGTTGGACAGATCATAGGGGAGGTTCTCAGGCCTCTTGACAATGAAAGATTGATTGTGAAAGCTAGCAGTGGACCGAGATATGTGGTCGGTTGCAGGAACAAAGTTGACAAGGAAAAGCTAACTTCTGGCACTCGTGTGGTTCTTGATATGACTACCCTTACAATCATGCGTGCACTTCCACGAGAAGTTGATCCAGTTGTATACAATATGCTTCATGAGGATCCCGGAAATATTAGTTATTCCGCTGTTGGAGGGTTATCAGATCAGATCCGTGAGCTCAGGGAATCAATAGAGCTTCCACTAATGAATCCTGAGCTTTTCCTCAGGGTGGGAATTAAACCCCCAAAGGGTGTTCTTCTGTATGGGCCTCCTGGGACGGGCAAGACTTTGTTAGCTCGAGCTATTGCTAGCAACATAGATGCCAATTTCCTGAAGGTTGTGTCTAGTGCCATCATAGATAAATACATTGGTGAAAGTGCAAGATTGATCCGTGAAATGTTTGGTTATGCTCGTGATCACCAGCCATGTATCATCTTCATGGATGAGATTGATGCCATTGGAGGTCGTCGATTCAGTGAAGGGACTAGTGCTGACCGTGAAATTCAAAGAACTCTCATGGAGTTGCTGAATCAGTTGGATGGATTTGACCAACTTGGAAAGGTGAAAATGATTATGGCAACCAATAGACCAGATGTGTTGGACCCTGCACTTCTCCGTCCAGGGCGTTTGGATAGGAAGATTGAGATTCCATTGCCAAATGAACAGTCAAGGATGGAAATCCTCAAAATTCATGCTGCTGGCATTGCAAAACACGGTGAGATCGACTATGAAGCAATTGTTAAGCTAGCAGAGGGATTTAATGGGGCTGATCTACGGAACGTTTGTACTGAGGCTGGAATGTCAGCTATTCGTGCAGAGCGTGACTATGTTATTCATGAAGACTTTATGAAGGCTGTACGGAAGTTGAGTGAAGCTAAAAAATTGGAATCAAGCGCTCACTATAGCGCTGATTTCGGCAAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42837.p1 GENE.R_Transcript_42837~~R_Transcript_42837.p1 ORF type:complete len:398 (+),score=87.38,AAA|PF00004.25|4e-42,AAA_16|PF13191.2|0.00015,AAA_16|PF13191.2|45,AAA_5|PF07728.10|4.3e+02,AAA_5|PF07728.10|0.00011,RuvB_N|PF05496.8|7.1e-06,AAA_2|PF07724.10|4.3e+03,AAA_2|PF07724.10|1.6e-05 R_Transcript_42837:94-1287(+)
MATEEDVRRRTAIADYRKKLLQHRELESRNRKVKEELRAAKKEFGKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLSEAKKLESSAHYSADFGKE*

Click here to download the sequence:
Link to NCBI Protein BLAST