Transcript Information: R_Transcript_42867.p1


Annotated TAIR IDAT2G40000.1
Annotated Gene NameOrtholog of sugar beet HS1 PRO-1 2
Annotated Gene Symbol(s)HSPRO2, ATHSPRO2
Annotation TypeOrtholog
Chromosome Positionchr2:16700649-16701956 | Reverse length=435
E-Value2.2E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.152542187502
Replicate 231.151900617655
Replicate 340.3176168439
Condition 2: 8 Hour
Replicate 138.444217901817
Replicate 263.94954691625
Replicate 374.522639380053
Condition 3: 24 Hour
Replicate 129.875994818394
Replicate 218.287661882398
Replicate 325.500646343468


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42867.p1 GENE.R_Transcript_42867~~R_Transcript_42867.p1 ORF type:5prime_partial len:521 (+),score=59.72,Hs1pro-1_C|PF07014.8|3.9e-125,Hs1pro-1_N|PF07231.8|9.6e-71 R_Transcript_42867:2-1564(+)
CCAAGTAACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATCACTTTATCCGAAACACAACCCCTCTCACTTTCTATCTATCTTCTATATCTGGTCCAGTCTGTTCTGGTCTTCAAAATTCAAAGATGGTGGATTTTGATTGTAAGACTAAGATGGTGCCCTCCACACCTAATCTCCAAAATAAGTCCCCCAAAATCACTTCACGAAGAAGTATGCCGGTTTTGTCTTCACCGCCGGTTCGCTCCGGCGAATTATCTCCGGCTTCTGAAGGGGCTTGCTTAGCTTATGAAAGTTATCTCCGGTTGCCGGAGCTCCGGAGACTATGGAGTGCTAAGGAGTTTCCTGGGTGGGACAATGAGTTGATTATCAAACCGGCTTTGCAAGGGTTAGAAATCACGTTCCGGTTCATTTCTATTGTTTTGTCTGATGCTAGACCGTACTTGAACCGAAGGGAATGGAACCGACGGTTGGAGGAGTTGGCTAGGGATCAGGTGGAGCTGATCTCGGTTTTATGTGAAGAGGACGAGACACGTGGCGATGCTCCGATCGTTGATTTGAGTTCGTCATGTGGGGTGGTGGTGGCCCACACGGGTAGTTCAGCGGAGGTTTGGAAGATGTCTGGTGGGGAGCATGAGACTACGGTGGTCAGCCGTACCAGTGAATCAAGCCTCCTCCCTCGTCTGGCCACGTGGCATAAATCAAGCGACATAGCATCTAGAATATTCTATGCCATCGAGTCGGCCATGAGACGGTGCGCTTACACATTGGGCCTAGGCGAGCCCAATCTCGAGGCAAAGCCCAATCTAGATTACGACGCCGTTTGCCGCCCATCTGAGCTCCACGCGCTAAAGAAATCCCCTTTGAACCACATCCAAAACCCGGAAAACCCAACCCTGTTTACAATCCACCAAATATTGGAATCCTGGATCTTCACCGCCAAGCAGCTGCTAAGGCGCATAAGAGAGAGAATCAGCAAGGAAGAATTCTCGAAAGCAGCTGATGATTGTTGGGTTCTGGAACGGATCTGGAAGCTTCTAAAAGAAATCGAGAATCTCCATCTCTTAATGGACCCTGACGACTTCCTTCACCTCAAAACCCAACTCAGAATGAAAACATCATCAGATTCAGAGACCTTCTGTTTCAGATCAAGGGGTGTATTAGAGATAACAAAAATGAGTAAAGATCTGAGGCACAGGGTCCCGGAAATCCTAGCTGTACAGGTGGATCCAATGGGGGGTCCCATCATACAAGAGACAGCCATGGGGCTTTACAGAGACAAGAGAAGCTTCGAGAAGATTCATCTATTGCAGGCCTTCCAAGGGGTGGAGTCTGCTGTGAAGGGGTTCTTCTATAACTACAAGCAGTTGCTGGTGATCATGATGGGGAGCTTAGAAGCTAAAGCTAACAGGGCTGTCATGGATTCTGAGTCCTCTGATTTGTTGGCTCAGATCTTTCTAGAACCAACCTACTATCCTAGCTTGGATGGGGCCAAGACCTTCATCGGGGATTTTTGGGAACATAATCAGAATAATAGCCATCGGTCTACAAGGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42867.p1 GENE.R_Transcript_42867~~R_Transcript_42867.p1 ORF type:5prime_partial len:521 (+),score=59.72,Hs1pro-1_C|PF07014.8|3.9e-125,Hs1pro-1_N|PF07231.8|9.6e-71 R_Transcript_42867:2-1564(+)
PSNPKKKKKKKKKKKHHFIRNTTPLTFYLSSISGPVCSGLQNSKMVDFDCKTKMVPSTPNLQNKSPKITSRRSMPVLSSPPVRSGELSPASEGACLAYESYLRLPELRRLWSAKEFPGWDNELIIKPALQGLEITFRFISIVLSDARPYLNRREWNRRLEELARDQVELISVLCEEDETRGDAPIVDLSSSCGVVVAHTGSSAEVWKMSGGEHETTVVSRTSESSLLPRLATWHKSSDIASRIFYAIESAMRRCAYTLGLGEPNLEAKPNLDYDAVCRPSELHALKKSPLNHIQNPENPTLFTIHQILESWIFTAKQLLRRIRERISKEEFSKAADDCWVLERIWKLLKEIENLHLLMDPDDFLHLKTQLRMKTSSDSETFCFRSRGVLEITKMSKDLRHRVPEILAVQVDPMGGPIIQETAMGLYRDKRSFEKIHLLQAFQGVESAVKGFFYNYKQLLVIMMGSLEAKANRAVMDSESSDLLAQIFLEPTYYPSLDGAKTFIGDFWEHNQNNSHRSTRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST