Transcript Information: R_Transcript_428717.p1


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value8E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11930039839685
Replicate 21.0978457734012
Replicate 30.14971723919054
Condition 2: 8 Hour
Replicate 10.16003833298853
Replicate 20
Replicate 30.11863797791103
Condition 3: 24 Hour
Replicate 10
Replicate 20.14415201889266
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_428717.p1 GENE.R_Transcript_428717~~R_Transcript_428717.p1 ORF type:complete len:153 (+),score=10.97,zf-RVT|PF13966.2|3.3e-10,zf-RVT|PF13966.2|1.2e+03 R_Transcript_428717:304-762(+)
ATGTGGATCTTCATGTTAGGGAAAGCTCGAACAAGACACATATTGAAACAATTGGGGTTGTGTCCTGATGATGTATGTCCTTTGTGTGGAAGCAGCAGTGAAACAATTGAGCATCTGTTCTTCTCGTGCCCATTCAGTTGTCTACTGATCAGACTTTTTTGCTGCTGGTGGGGTATATCAAGGACTAATTGGTCCCTTGGTTCTTTTCCAAAATGGGTGCACAAAAATACAGGGTTCGCAAAAGTCTGTAAGAAAGTGATTTATGCATGGTATGTTGCACTTGTCTATACCATCTGGAAAACTAGGAATCTAGCTATATGGGAGCACAAAGTACCAACTTCGGACTGTATCTTCAAGCTCATGAAGAAGCAGCTTCATTACAGAATTACTTCCTGTACTGCTAGGAGAATCTCACAGAAGGAGAGAAGCTGGATTTCCAGTGTACTGCATGTAATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_428717.p1 GENE.R_Transcript_428717~~R_Transcript_428717.p1 ORF type:complete len:153 (+),score=10.97,zf-RVT|PF13966.2|3.3e-10,zf-RVT|PF13966.2|1.2e+03 R_Transcript_428717:304-762(+)
MWIFMLGKARTRHILKQLGLCPDDVCPLCGSSSETIEHLFFSCPFSCLLIRLFCCWWGISRTNWSLGSFPKWVHKNTGFAKVCKKVIYAWYVALVYTIWKTRNLAIWEHKVPTSDCIFKLMKKQLHYRITSCTARRISQKERSWISSVLHVI*

Click here to download the sequence:
Link to NCBI Protein BLAST