Transcript Information: R_Transcript_42884.p1


Annotated TAIR IDAT2G25280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10762639-10764631 | Reverse length=291
E-Value2E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 173.41112733976
Replicate 267.844295720163
Replicate 366.787456803782
Condition 2: 8 Hour
Replicate 157.618300953986
Replicate 271.135555357272
Replicate 366.026483631658
Condition 3: 24 Hour
Replicate 177.984801426607
Replicate 268.509147928856
Replicate 376.059773786968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42884.p1 GENE.R_Transcript_42884~~R_Transcript_42884.p1 ORF type:complete len:320 (+),score=58.53,Memo|PF01875.13|4.5e-83 R_Transcript_42884:195-1154(+)
ATGGAAAAGCAAGTCTTGATCTTGAGGTTCTCCTTTTCCTTTCAATCACCAATTTCTCTCTCCAATTTCCTCGTCAATTCCGCAATGGAGGTAGCAAGGAGAGCTTCCCATGCTGGTTCATGGTATACCAACAACCCTAGTAAGCTAGCAGGAGAACTTGAAGGATGGCTAAAAGAAGCTGGTCTCGACAAGTCTTCTGATGTACGAGGTGTTATTGCTCCGCATGCAGGATATTCATATTCAGGCCGTGCAGCAGCCTATGCATTTGCAAACATAGACCCAACTAACATTAAACGAGTTTTCCTGCTGGGTCCCTCTCATCACTATTACACTCCAAAATGTGCTGTTTCGAGTGCCACTGTATACAAGACTCCTATTGGAGATCTGCCTATTGATCTCGAAGTCATTGAAGAGCTGAAGGCAACTGGGAAATTCGAAGTGATGGATCTTCGGGTTGACGAGAATGAACACAGCATGGAGATGCACTTGCCTTATCTTGCAAAAGTCTTTGAAGGGCATACAGTAAAACTAGTGCCCATCTTAGTTGGGGCTGTTAGTGCTGAAAGTGAAGCCATGTATGGTCGATTGCTAGCTAAATATGTTGACGACCCAAGCAATTTCTTTTCAGTATCCTCAGACTTCTGTCACTGGGGTGCCCGCTTCAACTATACATATTATGACAAGAAGCACGGGGCCATTCACAAGTCCATTGAAGCTTTGGACCGTATGGGCATGGATATTATAGAGACTGGGGATCCTGATGCATTCAAGCAGTATTTATTGGAATATGATAACACTATCTGTGGCCGCCATCCTATTAGTGTCTTCCTTCATATGTTGAAGAATTGCTCGACCAAGATAAAGATTGGATTCCTTCGTTATGAGCAGTCTAGTCAGTGCAAAAGCATGCGCGACAGTAGTGTGAGCTATGCATCAGCAGCAGCCAAGGTGGAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42884.p1 GENE.R_Transcript_42884~~R_Transcript_42884.p1 ORF type:complete len:320 (+),score=58.53,Memo|PF01875.13|4.5e-83 R_Transcript_42884:195-1154(+)
MEKQVLILRFSFSFQSPISLSNFLVNSAMEVARRASHAGSWYTNNPSKLAGELEGWLKEAGLDKSSDVRGVIAPHAGYSYSGRAAAYAFANIDPTNIKRVFLLGPSHHYYTPKCAVSSATVYKTPIGDLPIDLEVIEELKATGKFEVMDLRVDENEHSMEMHLPYLAKVFEGHTVKLVPILVGAVSAESEAMYGRLLAKYVDDPSNFFSVSSDFCHWGARFNYTYYDKKHGAIHKSIEALDRMGMDIIETGDPDAFKQYLLEYDNTICGRHPISVFLHMLKNCSTKIKIGFLRYEQSSQCKSMRDSSVSYASAAAKVEA*

Click here to download the sequence:
Link to NCBI Protein BLAST