Transcript Information: R_Transcript_42894.p1


Annotated TAIR IDAT5G65540.1
Annotated Gene Nameunknown protein; Has 6825 Blast hits to 3811 proteins in 289 species: Archae - 0; Bacteria - 184; Metazoa - 2139; Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes - 2874 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26195710-26198112 | Forward length=605
E-Value1.3E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.457482125276
Replicate 217.733621192559
Replicate 319.22155860445
Condition 2: 8 Hour
Replicate 123.008655544578
Replicate 230.659344389194
Replicate 331.989310124411
Condition 3: 24 Hour
Replicate 124.678593509854
Replicate 219.273151279152
Replicate 320.727296211724


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42894.p1 GENE.R_Transcript_42894~~R_Transcript_42894.p1 ORF type:complete len:547 (+),score=98.89 R_Transcript_42894:122-1762(+)
ATGGCAGTGTTGGGAGAGGACGGGAAAGGGTACGAGCTAGCAAGAAAGCTTGAATCATGTGGGGTATGGCGATGGTGGCTTGGCGAATCTCTTTATTCCAATTTTGCCCCTTCCCTCTCTTCGTCATCTTCTTGGGACTCTTTCATGTCAGTTGATGACTCCAAGTCCAAGTCTCAGATCCAACTTCAGCTCCGTGTTCGTGCTCTCCTTTTCGACAAAGCTGCTTCTCTCTCCTCTTCTTCCCTCTCCAACCTCAATCCCTCTTATTTGCAATTGCACGGCGACGATGTTTACTTCACCCTTGAAGATGGTGTCTCTCAGCCTCAGCGTGATCCTCCCCCTTCTAAGATTCAATCCCAGAAAGGAAGACAGGAAGATTTTCCTGAAACTTGGTATAGCCAGTTTATTGAAAGCTACAGAGCTAAAAAGCCTTACCTAGTCAGTCGAGACATTCGAGAGCCAGACAGACGGAACCCTACTGATATGTCCAATTATCTGAAGCTTTTGGAGAGGCATAAGAGGAGACGGATAGAGTTCAAGGAGGGTGAGTATGGAGGATTTTGTGATGCAAATTCTGGCGATGGCAACACATGTTTCTTCCCAGAAACAATGTTCACGATGAATTGTGTTCCCGATTGTGCGATTGCACCGAGAACGGTTGCGGAGGGGAAACCAAAAGTTGAATTTTTTGGAGTTCTTGATACGTTACCACAAGTTGCAACTAAGAGCTCTATCATGCTAGAAAGGCTTGGTATCAGGCCTGAATATCTGGAGCAGGGGCCTGGCAAATCCCGCACAAAAGTCGGCTTGGATGGAAATAAAAATCATGTGAGTGAGGAGGAAGCATTGCAGATGTCTAAGAAGGTAGTTGCGCATGCTTTAAAAACTGTGGGCTTCGAAGGTGCCTTTGAAATACCTATTGAGGTCCTGTCCCAGTTTCTTAGTTGCCATGTCTCGAAACTAGGCCGCATACTCAAAGTCCTCACCGATAGTTATAGAAAACAGTGTTCAGCTATGGAACTGATTAAAATGTTCCTCCAAGCAGCGGGAAACAGTAACCTTGCCGCTTTAGCAGACCATGTAAAGGATAGCAGGAATGTTGTGCAGAAAAGTCCTCAGCAGAGTCATAACCTGCAGCCTCAGCTGCCTTTGCCGCAACAAATTGCCCTTCAGCATCCCCAACAAATTCCTCGACAAATGCATCCACAGATGCCGCAGATGGTTCACCCCCCAAATCTAACCTTACAGCATCAACAGCATCTGGAGAGAATGAGGCGGCGGCAAGCATCTTCTCCTCGCCCTGTCATGAGTATGGACAAGGATCGACCCATGGTTGAGGTTAAACTTGAGAACCTGTCCGACTTACCCATGGACAATAACACCTTTAGTGCGATCAACAGCAGACAAGCCAAGATGCAATGGCAGCAGCAGCAGATCGCTGCAATCCAGAGGATCATGGGACCGTCTGCGAACCAAATGAGACAAGCAGCTTCTGTGCAGATGCCCTCAATGCAATCACAGAATATCAATGCTGTTAGGGCACCTCCAGTCAAGGTGGAAGGTTTTCAAGAATTAATGGGTGGAGATTCTTCAATGAAGCAAAATTCAGATGAGAGTAGGCTGACTTCCCCTTCAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42894.p1 GENE.R_Transcript_42894~~R_Transcript_42894.p1 ORF type:complete len:547 (+),score=98.89 R_Transcript_42894:122-1762(+)
MAVLGEDGKGYELARKLESCGVWRWWLGESLYSNFAPSLSSSSSWDSFMSVDDSKSKSQIQLQLRVRALLFDKAASLSSSSLSNLNPSYLQLHGDDVYFTLEDGVSQPQRDPPPSKIQSQKGRQEDFPETWYSQFIESYRAKKPYLVSRDIREPDRRNPTDMSNYLKLLERHKRRRIEFKEGEYGGFCDANSGDGNTCFFPETMFTMNCVPDCAIAPRTVAEGKPKVEFFGVLDTLPQVATKSSIMLERLGIRPEYLEQGPGKSRTKVGLDGNKNHVSEEEALQMSKKVVAHALKTVGFEGAFEIPIEVLSQFLSCHVSKLGRILKVLTDSYRKQCSAMELIKMFLQAAGNSNLAALADHVKDSRNVVQKSPQQSHNLQPQLPLPQQIALQHPQQIPRQMHPQMPQMVHPPNLTLQHQQHLERMRRRQASSPRPVMSMDKDRPMVEVKLENLSDLPMDNNTFSAINSRQAKMQWQQQQIAAIQRIMGPSANQMRQAASVQMPSMQSQNINAVRAPPVKVEGFQELMGGDSSMKQNSDESRLTSPSK*

Click here to download the sequence:
Link to NCBI Protein BLAST