Transcript Information: R_Transcript_429033.p1


Annotated TAIR IDAT1G76110.1
Annotated Gene NameHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28555287-28557465 | Reverse length=338
E-Value3.6E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49332326904645
Replicate 20.11349351576377
Replicate 30.24764040644489
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.098116814164254
Condition 3: 24 Hour
Replicate 10
Replicate 20.11921761562474
Replicate 30.23662383445294


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_429033.p1 GENE.R_Transcript_429033~~R_Transcript_429033.p1 ORF type:5prime_partial len:185 (+),score=39.37,HMG_box|PF00505.15|2.9e-12,HMG_box_2|PF09011.6|1.2e-10 R_Transcript_429033:1-555(+)
CTTGATTGCTATCATCCATGTGGGCCTGATCATGAGGAATATATTCCCAGAGGGGTCCAAGATTCACCTGCTAGAGTTGTTGTAGGAACAATTGATGGAAAATTTGACTGTGGTTATTTAGTATCTGTTCAACTGGGTGACGATGTTCTTTGTGGAGTAATTTACCATCCAGACGAGCCATCTGTTACTTGTGCGGCTCCAGGTGAAGATCTTAGCATGGCTATAGTCCCCTATGATACGACCTCCAACCACTGTCGATCATCAAGGAGGAGGAGGCGTAAAAGGAAGAGATGGGGAGGAGACCCTAACCATCCGAAACCAAATAGAAGCGGATACAATTTCTTCTTTGCTGAGAAACATTCAGCTCTCAAGTCTCTTTATCCTAACAGAGAAAGAGAGTTCACCAAGATGATTGGGGAGTCTTGGAACAGTCTCAGCCCTGAAGAAAGAGCAGTTTATCAGAATATCGGATTAAGGGACAAGGAACGATACAGGAGGAAACTCAAGGAATACAATGAGAGGCAGGCAGCGCTCAGAGGAGGCAAGGAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_429033.p1 GENE.R_Transcript_429033~~R_Transcript_429033.p1 ORF type:5prime_partial len:185 (+),score=39.37,HMG_box|PF00505.15|2.9e-12,HMG_box_2|PF09011.6|1.2e-10 R_Transcript_429033:1-555(+)
LDCYHPCGPDHEEYIPRGVQDSPARVVVGTIDGKFDCGYLVSVQLGDDVLCGVIYHPDEPSVTCAAPGEDLSMAIVPYDTTSNHCRSSRRRRRKRKRWGGDPNHPKPNRSGYNFFFAEKHSALKSLYPNREREFTKMIGESWNSLSPEERAVYQNIGLRDKERYRRKLKEYNERQAALRGGKEK*

Click here to download the sequence:
Link to NCBI Protein BLAST