Transcript Information: R_Transcript_42906.p1


Annotated TAIR IDAT1G29880.1
Annotated Gene Nameglycyl-tRNA synthetase / glycine--tRNA ligase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10459662-10462781 | Reverse length=729
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.219848998757
Replicate 231.24581022478
Replicate 335.204038831982
Condition 2: 8 Hour
Replicate 148.424019757513
Replicate 255.107804853343
Replicate 368.450678997407
Condition 3: 24 Hour
Replicate 145.039592863825
Replicate 243.094815069088
Replicate 354.546464048663


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42906.p1 GENE.R_Transcript_42906~~R_Transcript_42906.p1 ORF type:5prime_partial len:760 (+),score=162.39,HGTP_anticodon|PF03129.16|2.4e+03,HGTP_anticodon|PF03129.16|9.4e+02,HGTP_anticodon|PF03129.16|3.3e-19,tRNA-synt_2b|PF00587.21|2.2e-10,tRNA-synt_2b|PF00587.21|1.8e+03,WHEP-TRS|PF00458.16|2.9e-08 R_Transcript_42906:3-2282(+)
CATTCAAAGTTCAAACCAAAGCAAAAGATCTTTATGAATCGAGCTGTTAATATCCTCAAAAATATCACCACGACCACCAGCAGCAATACAGCATTATTAGCACCCTCATCACTGTTGCTCCACTCACTAAAACCATCAACTCCACTTCTAAAACCCTCATTCTTCTCTCTCCTCTCCATTCACTCAACGCGTAACATCAAAATGAGCCTCAGCGAGAACACTCTCCGGCAAACCCTAGCCGAGAAGCAAGCCGCCATTGACGCCCAAGCGAGCGCCGTGAGAGAGCTCAAGTCGTCCAAAGATGCTGACAAGTCCGCCATTGATGCAGCAGTCCAAGCTCTGAAATCGTTGAAGCTTGAGAAATCGTCGATCGAGGAGCAGTTACAGCAACTGGTGAAGAACAATGGCGGTGATAGTTCAGCTAATCGAGAGGCTTTTCGACTAAGCGTGATTAATACGCTTGAGAGAAGGCTGTTTTATATTCCTTCCTTTAAGATCTATCGTGGTGTTGCTGGTTTGTATGATTACGGTCCTCCTGGTTGCGCTGTTAAGTCCAATGTCCTCGCCTTTTGGCGTCAGCATTTCGTCTTGGAGGAGAACATGTTGGAAGTTGATTGCCCATGTGTGACACCGGAGATTGTTCTAAAGGCCTCAGGCCACGTGGAGAAGTTCACTGACCTTATGGTAAAGGATGAAAAGACAGGCACCTGTTATCGTGCAGACCACTTGCTCAAGGATTTCTGCAAGGAGAAGCTTGAGAAGGACCTAAGTCTATCGGCAGAGAAAGCAGCAGAACTCAAGCATGTTCTGGCTATGTTGGATGACTTCTCTGCTGAGGAGTTAGGTGCAAAGATCAAGGAATATGGCATAGTAGCACCTGACACGAAAAATCCTCTTTCTGATCCTTATCCTTTTAATTTGATGTTTCAGACGTCAATAGGTCCCTCTGGTGTGAGCCCTGGGTATATGCGGCCAGAGACAGCACAAGGCATATTTGTGAACTTCAAGGATTTGTATTATTACAATGGCAACAAGCTACCTTTTGCTGCCGCTCAAATTGGTCAAGCATTCAGAAATGAGATATCTCCACGTCAAGGTCTTCTCAGGGTTCGTGAATTCACCCTAGCAGAAATAGAACACTTTGTGGATCCCGAAGATAAGTCACACCCTAAGTTTCCTGATGTTGCCAGCTTGGAGTTCCTGATGTTTCCAAGGGAGCTGCAGATGTCAGGGGCATCTGCAAAGAAGATGAACCTTGGCGAAGCAGTTGCTAAGGGTACTGTCAACAATCAGACTCTAGGTTATTTCATTGGGAGGGTTTATCTGTTCCTAACCAGTCTTGGTATCGACAAAGAGCGGTTGCGGTTCCGTCAGCATCTTGCAAATGAGATGGCACATTATGCTGCTGATTGTTGGGATGCAGAGATTGAATGTTCATATGGTTGGATTGAGTGTGTTGGTATTGCTGATAGATCTGCATATGATTTACGTGCTCACACGGATAAAAGCGGCGTAGCACTTGTTGCTCATGAGAAATTTGCAGAACCAAAAGAAGTGGAGAAAGTTGTTGTTACTCCTGTGAAAAAGGAACTTGGCCTTGCATTCAAGGGTAATCAAAAGATGATTGTCGAAGCATTGGAGGCCATGGATGAAAAAGAAGCTATGGAAATGAAGGCTAATTTGGAATCTAAGGGTGAAGTCGAGTTCTTTGTTTGCACCCTTGACAAGAATGTGACAATAACAAGCAAGATGGTAACAATCAAGAAGGAGAGGAAGAAAGAGCATCAAAGGGTCTTCACTCCATCAGTTATTGAGCCATCTTTTGGTATTGGACGTATAATATACTGTCTATATGAACATTCTTTCTACACCAGGCCAAGTAAAGCTGGGGATGAGCAATTGAATGTCTTTAGTTTCCCTCCCCTGGTCGCGCCTATCAAATGTACTGTGTTTCCTCTAGTTCAGAATCAAGATTACGAGGAAGTTGCCAAACGGATTGCCAAATCATTGACTGCTGTTGGCATCTCATGTAAAATTGATATTACAGGCACATCAATTGGCAAGCGCTATGCAAGAACTGATGAACTTGGAGTACCGTTTGCCATAACTGTTGATTCGAAGGACTCTGTCACAATCAGAGAGAGAGACAGTAAGCAACAGATTCGTGTTGATGTGAGTCTGGTTGCCTCCGTTGTGAAAGATGTAACTGATGGTCAAAGCACATGGGCAGATGTGCAATGGAAATACCCAACTCACTCCTCTGCATCTGCTGATGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42906.p1 GENE.R_Transcript_42906~~R_Transcript_42906.p1 ORF type:5prime_partial len:760 (+),score=162.39,HGTP_anticodon|PF03129.16|2.4e+03,HGTP_anticodon|PF03129.16|9.4e+02,HGTP_anticodon|PF03129.16|3.3e-19,tRNA-synt_2b|PF00587.21|2.2e-10,tRNA-synt_2b|PF00587.21|1.8e+03,WHEP-TRS|PF00458.16|2.9e-08 R_Transcript_42906:3-2282(+)
HSKFKPKQKIFMNRAVNILKNITTTTSSNTALLAPSSLLLHSLKPSTPLLKPSFFSLLSIHSTRNIKMSLSENTLRQTLAEKQAAIDAQASAVRELKSSKDADKSAIDAAVQALKSLKLEKSSIEEQLQQLVKNNGGDSSANREAFRLSVINTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLAFWRQHFVLEENMLEVDCPCVTPEIVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDFCKEKLEKDLSLSAEKAAELKHVLAMLDDFSAEELGAKIKEYGIVAPDTKNPLSDPYPFNLMFQTSIGPSGVSPGYMRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFPDVASLEFLMFPRELQMSGASAKKMNLGEAVAKGTVNNQTLGYFIGRVYLFLTSLGIDKERLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHTDKSGVALVAHEKFAEPKEVEKVVVTPVKKELGLAFKGNQKMIVEALEAMDEKEAMEMKANLESKGEVEFFVCTLDKNVTITSKMVTIKKERKKEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFSFPPLVAPIKCTVFPLVQNQDYEEVAKRIAKSLTAVGISCKIDITGTSIGKRYARTDELGVPFAITVDSKDSVTIRERDSKQQIRVDVSLVASVVKDVTDGQSTWADVQWKYPTHSSASADE*

Click here to download the sequence:
Link to NCBI Protein BLAST