Annotated TAIR ID | AT1G29880.1 |
Annotated Gene Name | glycyl-tRNA synthetase / glycine--tRNA ligase |
Annotated Gene Symbol(s) | |
Annotation Type | Ortholog |
Chromosome Position | chr1:10459662-10462781 | Reverse length=729 |
E-Value | 0 |
Replicate 1 | 39.219848998757 |
Replicate 2 | 31.24581022478 |
Replicate 3 | 35.204038831982 |
Replicate 1 | 48.424019757513 |
Replicate 2 | 55.107804853343 |
Replicate 3 | 68.450678997407 |
Replicate 1 | 45.039592863825 |
Replicate 2 | 43.094815069088 |
Replicate 3 | 54.546464048663 |
>R_Transcript_42906.p1 GENE.R_Transcript_42906~~R_Transcript_42906.p1 ORF type:5prime_partial len:760 (+),score=162.39,HGTP_anticodon|PF03129.16|2.4e+03,HGTP_anticodon|PF03129.16|9.4e+02,HGTP_anticodon|PF03129.16|3.3e-19,tRNA-synt_2b|PF00587.21|2.2e-10,tRNA-synt_2b|PF00587.21|1.8e+03,WHEP-TRS|PF00458.16|2.9e-08 R_Transcript_42906:3-2282(+)
CATTCAAAGTTCAAACCAAAGCAAAAGATCTTTATGAATCGAGCTGTTAATATCCTCAAAAATATCACCACGACCACCAGCAGCAATACAGCATTATTAGCACCCTCATCACTGTTGCTCCACTCACTAAAACCATCAACTCCACTTCTAAAACCCTCATTCTTCTCTCTCCTCTCCATTCACTCAACGCGTAACATCAAAATGAGCCTCAGCGAGAACACTCTCCGGCAAACCCTAGCCGAGAAGCAAGCCGCCATTGACGCCCAAGCGAGCGCCGTGAGAGAGCTCAAGTCGTCCAAAGATGCTGACAAGTCCGCCATTGATGCAGCAGTCCAAGCTCTGAAATCGTTGAAGCTTGAGAAATCGTCGATCGAGGAGCAGTTACAGCAACTGGTGAAGAACAATGGCGGTGATAGTTCAGCTAATCGAGAGGCTTTTCGACTAAGCGTGATTAATACGCTTGAGAGAAGGCTGTTTTATATTCCTTCCTTTAAGATCTATCGTGGTGTTGCTGGTTTGTATGATTACGGTCCTCCTGGTTGCGCTGTTAAGTCCAATGTCCTCGCCTTTTGGCGTCAGCATTTCGTCTTGGAGGAGAACATGTTGGAAGTTGATTGCCCATGTGTGACACCGGAGATTGTTCTAAAGGCCTCAGGCCACGTGGAGAAGTTCACTGACCTTATGGTAAAGGATGAAAAGACAGGCACCTGTTATCGTGCAGACCACTTGCTCAAGGATTTCTGCAAGGAGAAGCTTGAGAAGGACCTAAGTCTATCGGCAGAGAAAGCAGCAGAACTCAAGCATGTTCTGGCTATGTTGGATGACTTCTCTGCTGAGGAGTTAGGTGCAAAGATCAAGGAATATGGCATAGTAGCACCTGACACGAAAAATCCTCTTTCTGATCCTTATCCTTTTAATTTGATGTTTCAGACGTCAATAGGTCCCTCTGGTGTGAGCCCTGGGTATATGCGGCCAGAGACAGCACAAGGCATATTTGTGAACTTCAAGGATTTGTATTATTACAATGGCAACAAGCTACCTTTTGCTGCCGCTCAAATTGGTCAAGCATTCAGAAATGAGATATCTCCACGTCAAGGTCTTCTCAGGGTTCGTGAATTCACCCTAGCAGAAATAGAACACTTTGTGGATCCCGAAGATAAGTCACACCCTAAGTTTCCTGATGTTGCCAGCTTGGAGTTCCTGATGTTTCCAAGGGAGCTGCAGATGTCAGGGGCATCTGCAAAGAAGATGAACCTTGGCGAAGCAGTTGCTAAGGGTACTGTCAACAATCAGACTCTAGGTTATTTCATTGGGAGGGTTTATCTGTTCCTAACCAGTCTTGGTATCGACAAAGAGCGGTTGCGGTTCCGTCAGCATCTTGCAAATGAGATGGCACATTATGCTGCTGATTGTTGGGATGCAGAGATTGAATGTTCATATGGTTGGATTGAGTGTGTTGGTATTGCTGATAGATCTGCATATGATTTACGTGCTCACACGGATAAAAGCGGCGTAGCACTTGTTGCTCATGAGAAATTTGCAGAACCAAAAGAAGTGGAGAAAGTTGTTGTTACTCCTGTGAAAAAGGAACTTGGCCTTGCATTCAAGGGTAATCAAAAGATGATTGTCGAAGCATTGGAGGCCATGGATGAAAAAGAAGCTATGGAAATGAAGGCTAATTTGGAATCTAAGGGTGAAGTCGAGTTCTTTGTTTGCACCCTTGACAAGAATGTGACAATAACAAGCAAGATGGTAACAATCAAGAAGGAGAGGAAGAAAGAGCATCAAAGGGTCTTCACTCCATCAGTTATTGAGCCATCTTTTGGTATTGGACGTATAATATACTGTCTATATGAACATTCTTTCTACACCAGGCCAAGTAAAGCTGGGGATGAGCAATTGAATGTCTTTAGTTTCCCTCCCCTGGTCGCGCCTATCAAATGTACTGTGTTTCCTCTAGTTCAGAATCAAGATTACGAGGAAGTTGCCAAACGGATTGCCAAATCATTGACTGCTGTTGGCATCTCATGTAAAATTGATATTACAGGCACATCAATTGGCAAGCGCTATGCAAGAACTGATGAACTTGGAGTACCGTTTGCCATAACTGTTGATTCGAAGGACTCTGTCACAATCAGAGAGAGAGACAGTAAGCAACAGATTCGTGTTGATGTGAGTCTGGTTGCCTCCGTTGTGAAAGATGTAACTGATGGTCAAAGCACATGGGCAGATGTGCAATGGAAATACCCAACTCACTCCTCTGCATCTGCTGATGAGTGA
Click here to download the sequence:
Link to NCBI Nucleotide BLAST
>R_Transcript_42906.p1 GENE.R_Transcript_42906~~R_Transcript_42906.p1 ORF type:5prime_partial len:760 (+),score=162.39,HGTP_anticodon|PF03129.16|2.4e+03,HGTP_anticodon|PF03129.16|9.4e+02,HGTP_anticodon|PF03129.16|3.3e-19,tRNA-synt_2b|PF00587.21|2.2e-10,tRNA-synt_2b|PF00587.21|1.8e+03,WHEP-TRS|PF00458.16|2.9e-08 R_Transcript_42906:3-2282(+)
HSKFKPKQKIFMNRAVNILKNITTTTSSNTALLAPSSLLLHSLKPSTPLLKPSFFSLLSIHSTRNIKMSLSENTLRQTLAEKQAAIDAQASAVRELKSSKDADKSAIDAAVQALKSLKLEKSSIEEQLQQLVKNNGGDSSANREAFRLSVINTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLAFWRQHFVLEENMLEVDCPCVTPEIVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDFCKEKLEKDLSLSAEKAAELKHVLAMLDDFSAEELGAKIKEYGIVAPDTKNPLSDPYPFNLMFQTSIGPSGVSPGYMRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEDKSHPKFPDVASLEFLMFPRELQMSGASAKKMNLGEAVAKGTVNNQTLGYFIGRVYLFLTSLGIDKERLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHTDKSGVALVAHEKFAEPKEVEKVVVTPVKKELGLAFKGNQKMIVEALEAMDEKEAMEMKANLESKGEVEFFVCTLDKNVTITSKMVTIKKERKKEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFSFPPLVAPIKCTVFPLVQNQDYEEVAKRIAKSLTAVGISCKIDITGTSIGKRYARTDELGVPFAITVDSKDSVTIRERDSKQQIRVDVSLVASVVKDVTDGQSTWADVQWKYPTHSSASADE*
Click here to download the sequence:
Link to NCBI Protein BLAST