Transcript Information: R_Transcript_42932.p1


Annotated TAIR IDAT3G13160.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4229994-4231178 | Reverse length=394
E-Value2E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1474071711434
Replicate 20.88219749648311
Replicate 31.2191260905515
Condition 2: 8 Hour
Replicate 10.96022999793118
Replicate 21.4406170373873
Replicate 32.2880181454269
Condition 3: 24 Hour
Replicate 13.6655322464401
Replicate 22.5947363400679
Replicate 33.0655048581089


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42932.p1 GENE.R_Transcript_42932~~R_Transcript_42932.p1 ORF type:complete len:357 (+),score=67.07,PPR_2|PF13041.2|9.3e-06,PPR_2|PF13041.2|0.5,PPR_2|PF13041.2|4e-15,PPR_2|PF13041.2|7.4e-08,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|1.1e-13,PPR_1|PF12854.3|0.0085,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|5.9,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|8.9,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.0054,PPR|PF01535.16|44,PPR|PF01535.16|2e-06,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|7.2e-07,PPR_3|PF13812.2|7.1,PPR_3|PF13812.2|4,PPR_3|PF13812.2|0.14 R_Transcript_42932:178-1248(+)
ATGGCCACCATAAGAGCTCGTGTAAATCGCTTACTGAAAGCCCAGAAACCAGCAACTGTTGCTCGTTTCTCAACTGTTTCTCAGCCACCAGCAAAAACCCAGATTCCAGTTTCTGTAAAACAGCTAGTGAATGAACCCGATCTCGGAGAGCTCGTAAAGAAGTTCAAGCAACGGGCAACTGAGTCACTCAGTTTTCGCCACCGTCACAACATCTATGACTTCACCATTGCCCGTCTAGCTATTGCAAAGCAATATAATCTCATTGAAGACATCCTCGAGTCTCACAAGGACTTTGAGGAGATAACCCATGAAGGGTTTGCCATTCGCCTCATTCGGTTGTATGGTAGAGCGGGCATGTTCGATCATGCACGCAAGATGTTCGACGAAATGCCTGAACGAAACTGCACCCGAACGGTTAAGTCCTTGAATGCCCTTATAAAGGCTGGGGTGGAATGTAAGAGGTTTGATGAGGTTGGGAAGATTTTTAGGGAGATGTCGTTGGAGTTGTCGATCGATTTGGATTGCTCTTCGTATAATACTATGATCCATGCTCTTTGTGAGATGGGGTCATTGGATGATGCACTTTTGATGGTTGAGGAGATGAAGGCAAAGGGGCTGAGCCCGAATGTCATCACTTTCAATACACTTCTTGATGCGTTTTATAGGGAAAGGGGTTTTGAGGGAGGGGAGAGGATATGGAATATGATGGTTGAGGACAATGTTGTTTGTAATACTCGGAGTTACAACTTGAAGCTCCAGGCTACGGTTGATCTAGGAGAGCTTGATAGTGCGGTTGATTTGTTTGGAACATTGGAGAAAGAAGGGTTGAAGCCTGATGTCAATACTTTCAATGCCTTGATCAAGGGATTCTGTGATCAAGGAAATGTGGAAGAAGCAAAAGGGTGGTTCAATTCATTGGTAGAAAGTGGTGGTACCCCAAATAGAATTACATTTTCGATTCTCATCACCATGGTGATTATGAGTTGGCGTTTGATTTGTGCAAGAAGATGTTCAACCGGCAACTTGTGGTTGACGAGGCTCTGTTGCAGCTCGTTGTCAAACTGCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42932.p1 GENE.R_Transcript_42932~~R_Transcript_42932.p1 ORF type:complete len:357 (+),score=67.07,PPR_2|PF13041.2|9.3e-06,PPR_2|PF13041.2|0.5,PPR_2|PF13041.2|4e-15,PPR_2|PF13041.2|7.4e-08,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|1.1e-13,PPR_1|PF12854.3|0.0085,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.2e-09,PPR_1|PF12854.3|5.9,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|8.9,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.0054,PPR|PF01535.16|44,PPR|PF01535.16|2e-06,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|7.2e-07,PPR_3|PF13812.2|7.1,PPR_3|PF13812.2|4,PPR_3|PF13812.2|0.14 R_Transcript_42932:178-1248(+)
MATIRARVNRLLKAQKPATVARFSTVSQPPAKTQIPVSVKQLVNEPDLGELVKKFKQRATESLSFRHRHNIYDFTIARLAIAKQYNLIEDILESHKDFEEITHEGFAIRLIRLYGRAGMFDHARKMFDEMPERNCTRTVKSLNALIKAGVECKRFDEVGKIFREMSLELSIDLDCSSYNTMIHALCEMGSLDDALLMVEEMKAKGLSPNVITFNTLLDAFYRERGFEGGERIWNMMVEDNVVCNTRSYNLKLQATVDLGELDSAVDLFGTLEKEGLKPDVNTFNALIKGFCDQGNVEEAKGWFNSLVESGGTPNRITFSILITMVIMSWRLICARRCSTGNLWLTRLCCSSLSNCW*

Click here to download the sequence:
Link to NCBI Protein BLAST