Transcript Information: R_Transcript_42936.p1


Annotated TAIR IDAT1G22040.1
Annotated Gene NameGalactose oxidase/kelch repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7768370-7769797 | Forward length=475
E-Value8.6E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.604059019734
Replicate 28.7337552151828
Replicate 313.378304730526
Condition 2: 8 Hour
Replicate 117.489903533747
Replicate 221.985068700998
Replicate 325.358867778482
Condition 3: 24 Hour
Replicate 114.758590360667
Replicate 211.629978952804
Replicate 314.852371037537


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42936.p1 GENE.R_Transcript_42936~~R_Transcript_42936.p1 ORF type:complete len:476 (+),score=80.74,Kelch_1|PF01344.21|5.8e+02,Kelch_1|PF01344.21|0.5,Kelch_1|PF01344.21|1.5e-14,Kelch_1|PF01344.21|3.4e-14,Kelch_1|PF01344.21|3.3e+03,Kelch_1|PF01344.21|0.05,Kelch_1|PF01344.21|8.3e+02,Kelch_1|PF01344.21|9.1e+02,Kelch_6|PF13964.2|0.03,Kelch_6|PF13964.2|1.5e-11,Kelch_6|PF13964.2|3.5e-07,Kelch_6|PF13964.2|2.6e+02,Kelch_6|PF13964.2|1.7,Kelch_2|PF07646.11|3.1e+02,Kelch_2|PF07646.11|5.4e-06,Kelch_2|PF07646.11|2.9e-05,Kelch_2|PF07646.11|1e+04,Kelch_2|PF07646.11|70,Kelch_2|PF07646.11|4e+03,Kelch_3|PF13415.2|1.1e+04,Kelch_3|PF13415.2|84,Kelch_3|PF13415.2|0.00061,Kelch_3|PF13415.2|0.0083,Kelch_3|PF13415.2|1.4e+02,Kelch_3|PF13415.2|7.9e+03,Kelch_4|PF13418.2|27,Kelch_4|PF13418.2|7.6,Kelch_4|PF13418.2|0.01,Kelch_4|PF13418.2|2.4e+02,Kelch_4|PF13418.2|2.9e+03,F-box|PF00646.29|4e-07,F-box-like|PF12937.3|7.3e-06,F-box-like|PF12937.3|1.3e+03 R_Transcript_42936:336-1763(+)
ATGGGTTCTGCATTTAGTCTGAACAGTTCCGGTAATTGTAATAGTAACCATTATGAGGGGTCATTGAATGAAACATGCAAGCGGCGAAGAATAGCAACTTACTGTGAGCAAAGTACGAGGTTAATTCCGTGCCTGCCAGATGAGATATCACTCCAGATTCTTGCCAGAGTACCCAGAGTTTACTATTTGAAACTGAAGTTAGTTTCTCGGAACTGGAAAGAAGCCGTATCTACTCCTGAAATTTATAATTTGAGAAGAGAACTCAAGACAACAGAGGAATGGCTTTTCATATTATCACGTGTTGAAGAAAGCTTATTGTGGTATGCGTTGGATCCTGTTTCTCAGAGATGGCAAAAACTGCCGCCCATGCCTCATGATAGCATACAAGATGCATTTCGGAAAGGGTTGGCCATTCTTCAAATGTGGAATTTGTTGGGATCAAGGGTGAAAATAGCAGATGCCATTAGACGGTGGCTTGGTAGAGAGAATGCACTGGATCAGATGCCATTTTGCGGCTGTTCCATTGCAGCTGTAGGTGGTTGCCTTTATGTGCTAGGGGGACTGTCAAGAGCCTCAGCCTTAAGATGTGTGTGGTGCTATGATCCTATTATAAATACTTGGAGTGAAGTGAGCCCTATGTTAACTGGTAGAGCGTATTGTAAGACAGGGGTCATAAACAGCAAACTTTATGTTGTTGGAGGGGTAAGCAGGTATCGAGGTGGGTTAACTCCCTTGCAATCTGCTGAAGTGTATGATCCTGAGAGTGGTCAATGGTCTGAGGTTCCTAGCATGCCATTCTCAAAAGCTCAAGTTATGCCTACTGCTTTTCTGGCTGACCTGCTGAAGCCTATAGCAACAGGATTGACGACGTACAGAGGTAAATTATATGTGCCTCAGAGCTTGTATTGCTGGCCTTTCTTTGTTGATGCTGGCGGAGAGATATATGATCCTACCACAAACACTTGGATCGAAATGCCTCTTGGTATGGGCGAGGGCTGGCCTGCTAAGCAGGCAGGAACCAAATTGAGTGCTGTCGTTGATGATGAGTTGTATGCCCTAGATCTGTCTGGTTCGCTAGAGAGTGCTAAAATCAAAGTATATGATCACCAAGATGACTCTTGGAAAGTTGTTTCTGGGGAAGTTCCTATGACTTATGATCAGACAGACTCTGAATGTCCATACTTACTTGTTGGTTTCCTGGGGAAGCTTCACGTGGTCATTAAAAATGCTAGTAGTGATATTGCAGTTTTGCAAGCCACCACAGAATCTCCTTTACAATCTTGCAGTTCAAATTCATCGCCTGATGGAAGTTCCTCTAGTGAAGGTTCGGTCGCATCTTCTCCTCCATCAGGAAGTGTATGGAAAGTCATTGCATCGAGGAGAGCTGGAGTTGGTGAATTGGTTAGTTGTCAAACCTTAAGCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42936.p1 GENE.R_Transcript_42936~~R_Transcript_42936.p1 ORF type:complete len:476 (+),score=80.74,Kelch_1|PF01344.21|5.8e+02,Kelch_1|PF01344.21|0.5,Kelch_1|PF01344.21|1.5e-14,Kelch_1|PF01344.21|3.4e-14,Kelch_1|PF01344.21|3.3e+03,Kelch_1|PF01344.21|0.05,Kelch_1|PF01344.21|8.3e+02,Kelch_1|PF01344.21|9.1e+02,Kelch_6|PF13964.2|0.03,Kelch_6|PF13964.2|1.5e-11,Kelch_6|PF13964.2|3.5e-07,Kelch_6|PF13964.2|2.6e+02,Kelch_6|PF13964.2|1.7,Kelch_2|PF07646.11|3.1e+02,Kelch_2|PF07646.11|5.4e-06,Kelch_2|PF07646.11|2.9e-05,Kelch_2|PF07646.11|1e+04,Kelch_2|PF07646.11|70,Kelch_2|PF07646.11|4e+03,Kelch_3|PF13415.2|1.1e+04,Kelch_3|PF13415.2|84,Kelch_3|PF13415.2|0.00061,Kelch_3|PF13415.2|0.0083,Kelch_3|PF13415.2|1.4e+02,Kelch_3|PF13415.2|7.9e+03,Kelch_4|PF13418.2|27,Kelch_4|PF13418.2|7.6,Kelch_4|PF13418.2|0.01,Kelch_4|PF13418.2|2.4e+02,Kelch_4|PF13418.2|2.9e+03,F-box|PF00646.29|4e-07,F-box-like|PF12937.3|7.3e-06,F-box-like|PF12937.3|1.3e+03 R_Transcript_42936:336-1763(+)
MGSAFSLNSSGNCNSNHYEGSLNETCKRRRIATYCEQSTRLIPCLPDEISLQILARVPRVYYLKLKLVSRNWKEAVSTPEIYNLRRELKTTEEWLFILSRVEESLLWYALDPVSQRWQKLPPMPHDSIQDAFRKGLAILQMWNLLGSRVKIADAIRRWLGRENALDQMPFCGCSIAAVGGCLYVLGGLSRASALRCVWCYDPIINTWSEVSPMLTGRAYCKTGVINSKLYVVGGVSRYRGGLTPLQSAEVYDPESGQWSEVPSMPFSKAQVMPTAFLADLLKPIATGLTTYRGKLYVPQSLYCWPFFVDAGGEIYDPTTNTWIEMPLGMGEGWPAKQAGTKLSAVVDDELYALDLSGSLESAKIKVYDHQDDSWKVVSGEVPMTYDQTDSECPYLLVGFLGKLHVVIKNASSDIAVLQATTESPLQSCSSNSSPDGSSSSEGSVASSPPSGSVWKVIASRRAGVGELVSCQTLSI*

Click here to download the sequence:
Link to NCBI Protein BLAST