Transcript Information: R_Transcript_429419.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11062400578617
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.44519754449537
Replicate 20.27104099201437
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.26530551135633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_429419.p1 GENE.R_Transcript_429419~~R_Transcript_429419.p1 ORF type:internal len:165 (+),score=15.10,RVT_1|PF00078.23|3.5e-24 R_Transcript_429419:1-492(+)
CTAAGCCACATAGTAGGGAAGGAGCAGACTACTTTCGTCAAAGGAAGGGACATATTTGATACTCCTAATACTCTCCTTGCACATGAGCTGACACAATACTATGAGAGAAGTAATATATGTCCTCGCACTTTTATGAAAGTTGATATTCGCAAAGCTTGTGATACTTTGAACTGGAATTCTGTTAAGCATATGTTGGAGTATTTTGGTTTCCCTGAGCAGTTTATTAGCTGGACCATGAACTGTTTAACCACTTCCAGATTTTTTGTTAATATTAATGGTAGTCCTAAAGGCTATTTTGGGGGGAAATATGGTCTTAGACAAGGGGACCCTATCTCTCCATACATTTTTGTTATTTGTATGGAGGGATTCTCGAGAATGTTGAGAAATATTGCCAGACAAAGGGAGTTCTCTTTTCATCCTAAAACAGAGAGAGTGAGATTAAACCATATAATTTTTACAGATGATTTACTCATCTTTACCAGGGGAGATTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_429419.p1 GENE.R_Transcript_429419~~R_Transcript_429419.p1 ORF type:internal len:165 (+),score=15.10,RVT_1|PF00078.23|3.5e-24 R_Transcript_429419:1-492(+)
LSHIVGKEQTTFVKGRDIFDTPNTLLAHELTQYYERSNICPRTFMKVDIRKACDTLNWNSVKHMLEYFGFPEQFISWTMNCLTTSRFFVNINGSPKGYFGGKYGLRQGDPISPYIFVICMEGFSRMLRNIARQREFSFHPKTERVRLNHIIFTDDLLIFTRGDF

Click here to download the sequence:
Link to NCBI Protein BLAST