Transcript Information: R_Transcript_43127.p1


Annotated TAIR IDAT5G19990.1
Annotated Gene Nameregulatory particle triple-A ATPase 6A
Annotated Gene Symbol(s)RPT6A, ATSUG1
Annotation TypeOrtholog
Chromosome Positionchr5:6752144-6754918 | Forward length=419
E-Value5.1E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.036796203847
Replicate 260.863349848726
Replicate 377.486988905503
Condition 2: 8 Hour
Replicate 168.197668297512
Replicate 277.793783985754
Replicate 3101.20083155761
Condition 3: 24 Hour
Replicate 183.555081120089
Replicate 268.34407384611
Replicate 385.06480784488


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43127.p1 GENE.R_Transcript_43127~~R_Transcript_43127.p1 ORF type:complete len:405 (+),score=103.29,AAA|PF00004.25|5.4e-43,AAA|PF00004.25|8.6e+03,AAA_2|PF07724.10|4.5e-07,AAA_16|PF13191.2|1.2e+04,AAA_16|PF13191.2|2.2e-05,AAA_16|PF13191.2|1.1e+03,AAA_16|PF13191.2|3.2e+03,AAA_5|PF07728.10|1e-05,AAA_5|PF07728.10|9.3e+03 R_Transcript_43127:323-1537(+)
ATGGCGAGTGTGGAGGTAGAGAAGAAAGCAGTGAAGCAAGGAGAAGGACTTCGACAGTACTATCTTCAACGTATCCATGAACTTCAGCTTCAAGTCCGTCACAAAAACCACAATCTCCAGCGCCTCGAAGCCCAGCGTAACGAGCTAAATTCCAGAGTTAGGGCGCTGAAAGAGGAATTGCAGCTGTTGCAAGAACCTGGATCATATGTCGGGGAAGTCGTGAAAGTGATGGGAAAATCAAAAGTTCTTGTCAAAGTGCATCCAGAAGGAAAATATGTTGTTGATATTGACAAGAACATTGACATTACTAAGCTTACTCCATCAACTAGAGTTGCATTGCGAAATGACAGCTATGTTCTCCATCTAGTCTTGCCAAGTAAGGTGGACCCTCTAGTCAACCTTATGAAAGTCGAGAAGGTTCCTGACTCTACATATGACATGATTGGTGGCCTCGACCAGCAAATTAAAGAGATTAAGGAGGTCATTGAGCTCCCAATAAAACATCCTGAGTTGTTTGAGAGTCTTGGAATTGCCCAACCAAAGGGTGTTCTTCTTTATGGTCCTCCTGGAACTGGGAAAACCTTGTTGGCAAGAGCTGTTGCTCACCACACAGATTGTACTTTTATTAGAGTATCAGGTTCTGAGTTGGTACAGAAGTACATTGGAGAGGGTTCTCGGATGGTGAGGGAGCTTTTTGTAATGGCCAGAGAGCATGCTCCATCAATCATTTTTATGGATGAGATTGATAGTATAGGGTCTGCAAGAATGGAGTCTGGCTCTGGAAATGGTGACAGTGAAGTTCAGCGAACTATGTTGGAGCTTCTCAACCAGCTCGATGGATTTGAAGCATCAAACAAGATCAAGGTGTTGATGGCTACAAACAGGATTGATATTCTGGATCATGCTCTTCTTAGGCCAGGGAGAATTGATAGGAAAATTGAGTTTCCAAATCCGAATGAAGAGTCACGTTTTGACATCTTGAAGATCCATTCAAGAAAGATGAACTTAATGAGAGGAATCGATCTAAAGAAGATTGCAGAGAAAATGAATGGTGCATCTGGTGCGGAGCTTAAGGCGGTGTGCACAGAAGCTGGTATGTTCGCTCTAAGGGAGAGAAGAATCCATGTGACACAAGAAGACTTTGAGATGGCAGTGGCGAAGGTAATGAAGAAGGATACAGAGAAGAACATGTCCCTTCGGAAGCTATGGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43127.p1 GENE.R_Transcript_43127~~R_Transcript_43127.p1 ORF type:complete len:405 (+),score=103.29,AAA|PF00004.25|5.4e-43,AAA|PF00004.25|8.6e+03,AAA_2|PF07724.10|4.5e-07,AAA_16|PF13191.2|1.2e+04,AAA_16|PF13191.2|2.2e-05,AAA_16|PF13191.2|1.1e+03,AAA_16|PF13191.2|3.2e+03,AAA_5|PF07728.10|1e-05,AAA_5|PF07728.10|9.3e+03 R_Transcript_43127:323-1537(+)
MASVEVEKKAVKQGEGLRQYYLQRIHELQLQVRHKNHNLQRLEAQRNELNSRVRALKEELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKNIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDHALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK*

Click here to download the sequence:
Link to NCBI Protein BLAST