Transcript Information: R_Transcript_43150.p1


Annotated TAIR IDAT1G24190.1
Annotated Gene NameSIN3-like 3
Annotated Gene Symbol(s)SIN3, ATSIN3, SNL3
Annotation TypeOrtholog
Chromosome Positionchr1:8563858-8569927 | Reverse length=1330
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.649340391155
Replicate 28.8905973725374
Replicate 314.030582625393
Condition 2: 8 Hour
Replicate 110.949107115159
Replicate 211.927947035341
Replicate 316.729234231011
Condition 3: 24 Hour
Replicate 117.57732904206
Replicate 212.779682721643
Replicate 317.387428956881


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43150.p1 GENE.R_Transcript_43150~~R_Transcript_43150.p1 ORF type:complete len:1391 (+),score=382.01,Sin3a_C|PF16879.1|4.6e+02,Sin3a_C|PF16879.1|1.5e-58,PAH|PF02671.17|2.2e-16,PAH|PF02671.17|1.6e-16,PAH|PF02671.17|1.2e-12,Sin3_corepress|PF08295.8|7.8e-37 R_Transcript_43150:450-4622(+)
ATGAAGAGGTCTAGAGAAGATATATATATGGGGCCTCAACTCAAGAGACCTCAACCTGTTGTTGCTTATCGAGGCGAGACTTCGGGTCAGCTTCAACCAGGAGGAGGAGGAGGTGGTGGTGGTGGCAGTGAAGGTGGCACCAGGGCAGCCAGTGGTCAGAGATTAACTACCAATGATGCCCTAGCTTATCTGAAGGCTGTGAAGGAGATGTTCCAGGACAAGAAAGAGAAATATGATGAGTTTCTAGAAGTTATGAAGGATTTCAAAGCTCAAAGAATTGACACTACTGGTGTGATAGCGAGGGTTAAAGAGTTATTCAAAGGGCATCGTAACCTAATCTTAGGTTTTAATACCTTCTTGCCGAAGGGATATGAAATCACGCTTCCTCCTGAGGATGATCAACCTCCTGCAAAGAAGCATGTGGAATTTGAAGAAGCAATCAATTTTGTCAACAAAATTAAGATGCGGTTTCAAGGTGATGATCGTGTTTACAAGTCATTCCTTGACATTTTGAATATGTATCGGAAAGAAAGCAAGTCAATAAGTGAAGTCTACCTGGAGGTTGCTGCTCTCTTTCGAGACCACAAGGACCTTCTTGAGGAATTCACCCATTTTCTTCCTGATACATCACCAGCAATGCCTGGTCAACATGCTCCATCTGGCCGGAATTCTACCTTCAGGGACAGGAACTCAGCGATGCCCACAAGGCCCATGCATGCTGACAGGAAGGACCGTGATTTTGCTGTTGATGGTTCTGATGCCGACAATGAGAAATTAATGAAAGCAGAGCGAGAGCAGAGGCGGAGGGAAAGAGACAAGAGAGACAGGGCTGAAGACTCTGCTGATCATGGAGAAGGTGCTGAAAATCATGGAACACGTGGTGTCTCTTGCTCTTATGATGATAAGAATGCGTTGAAAAGTATTTACAGCCATGAATATGCATTCTGTGAAAAAGTAAAGGAGAGAGTAGAGAAGCCTGATGATTATCAGGAATTTTTGAAATGCCTTCACATATACAGCAGGGAGATAATCACAAGACAAGAACTGCATTCTCTGGTGTCTGATCTGATTAGAGGGTATCCAGATCTTATGGATGGTTTCGAAGAATTCCTGGCACGCTGTGAGAGAACTGATGGATTTCTTGGTAGTGTTATGAGTAAAAAGTCCTTGTGGCCAGAATCCTTTTGGAGTGATGGTTGTCCTTCAAAACCTGTGAAAACTGAGGACAGAGAACGGGATCAAGATCGGGAACATGGGAGAGATGATAGAGAACGTGATAACAGAGAACGAGATCGCTCTGATAGAAGTGTTGTTTATATGAATAAAGAGCTTGCTGGTCTCAGGATGAGTTCAAATTCAAACAAGGATAAGTATATTGGAAAGCCAATTCAAGAGCTTGACCTCTCGAACTGTGAACGCTGCACCCCTAGTTATCGACTTCTTCCCAAAAATTACTCCATACCTATGGCAAGTCAGAGGACCGAACTTGGAGCTGAAGTACTGAATGATCATTGGGTCTCTGTCACCTCTGGAAGTGAGGACTACTCTTTCAAGCACATGCGGAAAAATCAGTATGAGGAGAGCCTCTTTCGCTGTGAAGATGACAGGTTTGAGCTAGACATGCTTTTAGAGTCTGTGAATGTTACAATCAAGCGTGTGGAGGATCTTCTAGAAAAAATAAATAACAATATGATAAACACAGAAAGTCCAATCCGCATTGAGGAGCACTTTACAGCTATAAATCTGAGATGCATTGAGCGATTGTATGGTGACCATGGACTTGATGTTATGGATGTGCTAAGGAAAAATGCAACTCTTGCTTTGCCAGTTATATTGACTCGCTTGAAACAGAAACAAGAAGAGTGGGCTAGATGCCGTGCTGATTTCAATAAGGTGTGGGCTGAAATTTATGCGAAGAACTATCACAAATCACTTGATCATCGTAGCTTTTACTTTAAGCAGCAGGATACAAAGAGCTTGAGCACAAAAGCTTTATTGGCAGAGGTTAAGGAAATCAGTGAGCAGAAGTGCAAAGATGATGATGTGCTTCATGCTATTGCTGCCGGAAATAGACGATCAATCACTCCCCATATGGAATTTGAGTACCCTGATCCAGAGATACATGAAAATTTATACCAATTGATGAAGTACTCCTGTGGAGAAGTTTGTACAGCTGACCAGCTGGATAAAGTGATGAAGATATGGACAACCTTCCTGGAACCCTTGCTTGGTGTTCCTGTGAGAGCTCAGGGTGCAGAGGACTCAGAGGATGATGTGAGAGCCAAGAATGAGACTGCTAAAGGTGATGGTCCAGCTGTTGTTGAGAGTGACGGAAGTCCTAGCGTCTGTGCTACTACTCGCAAACAACCAAATCAGTCCAGAAATGGAGATGAAGGTAGTCTGCCAGAACAATCCAGTTCTGGCAATCATGCCAAAGAAGATGGATGTCCTGAGGGTAATAGTAATGCTCTGCATCAGGCTAGAGCACAGGGTAATGGAATTGTGACTGATCAAGTATGTGGTCCTACTTCTAATGACCGTCTGACCAGCTCAAATGTGCCACTTTCATCTGGAGCTGAGCAATTTAATGGAAGGAATACTGAAAATGCATCAGGTCACAGTACAATGCCATCCAGGCCTGGGACTACAGCAGATAACAGCAGCCTTGACCTGAGGTCCAATGGTGGAAATTTACCTTCATTGGAGCCTGTAGATTCAGCAAGACCAGTTGCACCATCAAATGGGGCAATGACAGGAGCCAACAAAGATATAAGATACTGTGAGGAGTCTAATGGGCATATGAAAGTTGAAAGGGAGGAGGGTGAGTTGTCTCCAAATGGAGATTTTGAGGAGGACAATTTTGCAGTGTATGGTGATGCAGCTGGAGAGCATGCAAATAAACGAGATGTTGCTGCAAGTGTCCCACATCAAAGTAGACAACGGGGTGATGTACACCATCGTGCTGCTGGGAGAGAAAATGATGGAGATGCTGATGATGAAGGTGACGAGAGCGCTCACAGGACATCGGAAGAAAGTGAGAATGCTTCAGAGAATGGGGATGCTTCTGGAAGCGAGTCTGGTGATGGTGAGGATCGCTCCCCGGAGCATGAAGATGGGGACCATGACGACAATGGCAATAAGGCTGAGAGTGAGGGTGAGGCTGAAGGAATGGAAGATGGACATGAAGATGGAGATGGGACATCATTGCCACTTTCAGAGCGTTTTCCGCAAACTGTGAAACCTCTTGCCAAGCATGTTCCTGCTCCCTTAAATGAAGCAGCAAAAGGGAGCCGTGTTTTCTATGGAAATGATTCCTTCTATGTGCTCCTTAGGCTTCATCAAACTTTGTATGAAAGAATACAATCAGCAAAGATTAATTCATCATCAGCTGAAAGGAGATGGAAGTCATCCAATGACGCGCTTCCTGCTGATCTGTATTCAAGGTTCATGAATGCCCTTTACAGTTTGGTTGATGGAACTTCTGACAACACTAAATTTGAAGATGATTGCCGAGCTATTGTTGGTACTCAGTCATATGTTCTGTTCACTTTGGACAAGCTCATATATAAGCTTGTGAAACAGCTCCAAAATTTACTTACTGATGAGATGGACAACAAGCTTCTTCAGCTATATGCATATGAAAGTTCAAGGAAACATGGGAGATTCTTCGATGTGGTTTATCACGAAAATGCCCGTGTTCTTCTCCATGATGAGAACATTTATCGTATTGAATGTCAGTCATCCTCACCTACTCGGTTGTCCATTCAATTGATGGAGAAGGGGAACGACAAGCCAGAAATGACTATTGTTTCAATGGACCCTAACTTTGCAACCTATCTTCATAACGACTTTCTTTCAGTTGTCCCAGACAAGAAAGAGAAGCCTGGGATTTTCTTGAAGAGGAATAAACGCAAATTCGCAAGCGGAGATGAAATCTCTACTGCCTCACAGGTGATGGAAGGAGTACAAGTTGTCAATGGTCTCGAGTGTAAGATAGCTTGCACCTCATCCAAGGTGTCTTATGTATTAGATACGGAAGACTTCTTGTACCGGAATAGGAAGAGGAGGAGAACTTTGCATGTGAGCAACGGATGCCATGACCAAGCAAAGTCATCATCAAATGGCTCTTCACGCAGAGTAGAACGATTCCACAGATTACTTGCAAGCTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43150.p1 GENE.R_Transcript_43150~~R_Transcript_43150.p1 ORF type:complete len:1391 (+),score=382.01,Sin3a_C|PF16879.1|4.6e+02,Sin3a_C|PF16879.1|1.5e-58,PAH|PF02671.17|2.2e-16,PAH|PF02671.17|1.6e-16,PAH|PF02671.17|1.2e-12,Sin3_corepress|PF08295.8|7.8e-37 R_Transcript_43150:450-4622(+)
MKRSREDIYMGPQLKRPQPVVAYRGETSGQLQPGGGGGGGGGSEGGTRAASGQRLTTNDALAYLKAVKEMFQDKKEKYDEFLEVMKDFKAQRIDTTGVIARVKELFKGHRNLILGFNTFLPKGYEITLPPEDDQPPAKKHVEFEEAINFVNKIKMRFQGDDRVYKSFLDILNMYRKESKSISEVYLEVAALFRDHKDLLEEFTHFLPDTSPAMPGQHAPSGRNSTFRDRNSAMPTRPMHADRKDRDFAVDGSDADNEKLMKAEREQRRRERDKRDRAEDSADHGEGAENHGTRGVSCSYDDKNALKSIYSHEYAFCEKVKERVEKPDDYQEFLKCLHIYSREIITRQELHSLVSDLIRGYPDLMDGFEEFLARCERTDGFLGSVMSKKSLWPESFWSDGCPSKPVKTEDRERDQDREHGRDDRERDNRERDRSDRSVVYMNKELAGLRMSSNSNKDKYIGKPIQELDLSNCERCTPSYRLLPKNYSIPMASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTIKRVEDLLEKINNNMINTESPIRIEEHFTAINLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEVKEISEQKCKDDDVLHAIAAGNRRSITPHMEFEYPDPEIHENLYQLMKYSCGEVCTADQLDKVMKIWTTFLEPLLGVPVRAQGAEDSEDDVRAKNETAKGDGPAVVESDGSPSVCATTRKQPNQSRNGDEGSLPEQSSSGNHAKEDGCPEGNSNALHQARAQGNGIVTDQVCGPTSNDRLTSSNVPLSSGAEQFNGRNTENASGHSTMPSRPGTTADNSSLDLRSNGGNLPSLEPVDSARPVAPSNGAMTGANKDIRYCEESNGHMKVEREEGELSPNGDFEEDNFAVYGDAAGEHANKRDVAASVPHQSRQRGDVHHRAAGRENDGDADDEGDESAHRTSEESENASENGDASGSESGDGEDRSPEHEDGDHDDNGNKAESEGEAEGMEDGHEDGDGTSLPLSERFPQTVKPLAKHVPAPLNEAAKGSRVFYGNDSFYVLLRLHQTLYERIQSAKINSSSAERRWKSSNDALPADLYSRFMNALYSLVDGTSDNTKFEDDCRAIVGTQSYVLFTLDKLIYKLVKQLQNLLTDEMDNKLLQLYAYESSRKHGRFFDVVYHENARVLLHDENIYRIECQSSSPTRLSIQLMEKGNDKPEMTIVSMDPNFATYLHNDFLSVVPDKKEKPGIFLKRNKRKFASGDEISTASQVMEGVQVVNGLECKIACTSSKVSYVLDTEDFLYRNRKRRRTLHVSNGCHDQAKSSSNGSSRRVERFHRLLASS*

Click here to download the sequence:
Link to NCBI Protein BLAST