Transcript Information: R_Transcript_43160.p1


Annotated TAIR IDAT4G08920.1
Annotated Gene Namecryptochrome 1
Annotated Gene Symbol(s)CRY1, BLU1, HY4, OOP2, ATCRY1
Annotation TypeOrtholog
Chromosome Positionchr4:5724260-5726905 | Forward length=681
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.592432399305
Replicate 223.295165425382
Replicate 334.176183683603
Condition 2: 8 Hour
Replicate 118.766538828181
Replicate 221.446860393663
Replicate 324.113818488397
Condition 3: 24 Hour
Replicate 140.821327304151
Replicate 230.812967530339
Replicate 340.260595482468


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43160.p1 GENE.R_Transcript_43160~~R_Transcript_43160.p1 ORF type:complete len:685 (+),score=120.29,FAD_binding_7|PF03441.10|1.6e-75,DNA_photolyase|PF00875.14|5e-41,Cryptochrome_C|PF12546.4|2.6e-29 R_Transcript_43160:760-2814(+)
ATGACAGAAGGAGGGTGCAGTATAGTATGGTTCAGAAGGGATCTGAGAGTAGAAGACAATCCAGCACTATTAGCAGGGGTAAGGGCAGGGGCTGTAATTTGTGTATTTATATGGGCACCTGAAGAAGAAGGTCATTATTATCCAGGAAGGGTGTCTAGATGGTGGCTTAAACATAGCTTGGCTCAACTTGATTCTTCTTTACGCAGTCTTGGTACTTGTCTTGTTACTAAGCGATCTACTGATAGTGTTTCTTCTCTTCTTCAAGTCGTCAAGTCCACTGGTGCTACTCACCTCTTCTTCAATCACTTATATGATCCTCTGTCACTTGTTAGGGATCACCGCGCAAAGGAAGTTTTGACTGCGAATGGTATAACTGTGCGCTCCTTCAACGCGGATTTACTGTATGAACCATGGGAGGTTGTTGATGAGAGAGGCCAACCATTTACAACTTTTACATCTTTCTGGGAAAGATGCCTTAGCATGCCCTTTGATCCCGAGGCTCCCCTACTTCCACCTAAGAGGATCATCTCAGGTGATGTGTCACAGTGTCCGTCAGATACGTTGGTGTTTGAAGATGAATCGGAGAGGGGAAGCAATGCTCTACTTGCTCGGGCATGGTCACCTGGGTGGAGCAGTGCTGATAAGGCTCTCACCACTTTCATCAACGGACCATTAACAGAGTACTCCAAGAATCGGAGAAAGGCTGATAGTGCAACCACCTCCTTTCTCTCACCCCATTTGCATTTTGGGGAGGTCAGTGTGCGAAAGGTCTTTCATCTAGTTCGCATCAAGCAAGTTTCATGGGCCAATGAAGGGAACACAGCGGCTGATGAGAGTTGCAATGTGTTTCTCAAGTCTATTGGTTTGAGAGAGTATTCGAGATACATGAGCTTCAATCATCCATACAGTCACGAGAGGCCTTTACTTGGACACCTCAAGTTCTTTCCCTGGGTGATAGATGAAGGCTATTTCAAGTCATGGAGACAAGGGAGAACAGGCTATCCTTTGGTAGATGCCGGGATGAGAGAGCTATGGGCCACTGGCTGGCTACACGATCGAATACGAGTTGTTGTTTCTAGCTTCTTTGTCAAGGTTCTGCAGCTACCATGGAGGTGGGGTATGAAATACTTCTGGGATACACTCTTGGATGCAGATCTTGAAAGTGATGCCTTAGGCTGGCAATATATATCGGGTACTCTACCTGATGGACGTGAGTTCGACAGGATAGATAATCCACAGTTTGAAGGCTACAAATTTGATCCTAATGGTGAATACGTAAGGCGGTGGCTCCCGGAGCTTGCAAGACTACCCACTGAATGGATCCATCACCCATGGGATGCCCCAGAAACGGTACTACAAGCTGCAGGAGTGGAACTGGGATCGAATTATCCTCTCCCCATTGTAGAAATAGACGCAGCAAAAGCAAGGCTGCAAGAAGCCCTTTCACAGATGTGGCAACAGGAAGCAGCACACAGGGCCGCTATTGAGAATGGGACTGAAGAAGGGCTTGGAGATTCTGCTGAAACAGACCCTATTGCGTTCCCACAGGATCTACAGATGGATATTGACCGTGAACCTGCGAGAAATAACCAAATTGCAAATAACCGCCTTTACGAGGATCAGATGGTCCCTAGCATCACCTCCACCTTGTTCAGGGTTGAAGATGATGAAACCTCTTCTGATCTTCGGCAGCCTTTGGTGGAAGATGGCAGAGCAGAGGTTCCTAGAAATGTACATGCAGATCAAGAAAGAGAACCACTGCATCAAGGAGCTTTGCCAACTCCCACAAGCAATAACAATAATGGGCCGCCACCACAAGTAAATATCATATTTGGGTTGCAGAATGTAGATGACATCGCTGAATCATCAAGTACTAGTGGTAGCCGGGGAGAAAGGAGTGGTGGGGTGGTTCCTGTTTGGTCGCCCTCAAGCTCCACATTCCCAGATCAGTTCGTAACTGATGAAGCTGGAATAGGACCCAGTTCCTCTTTCTTGCAGAGGCATCCTCAGTCACACCAACTGGTCAATTGGAGGCGGCTTTCTCAAACTGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43160.p1 GENE.R_Transcript_43160~~R_Transcript_43160.p1 ORF type:complete len:685 (+),score=120.29,FAD_binding_7|PF03441.10|1.6e-75,DNA_photolyase|PF00875.14|5e-41,Cryptochrome_C|PF12546.4|2.6e-29 R_Transcript_43160:760-2814(+)
MTEGGCSIVWFRRDLRVEDNPALLAGVRAGAVICVFIWAPEEEGHYYPGRVSRWWLKHSLAQLDSSLRSLGTCLVTKRSTDSVSSLLQVVKSTGATHLFFNHLYDPLSLVRDHRAKEVLTANGITVRSFNADLLYEPWEVVDERGQPFTTFTSFWERCLSMPFDPEAPLLPPKRIISGDVSQCPSDTLVFEDESERGSNALLARAWSPGWSSADKALTTFINGPLTEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNTAADESCNVFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVIDEGYFKSWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWDAPETVLQAAGVELGSNYPLPIVEIDAAKARLQEALSQMWQQEAAHRAAIENGTEEGLGDSAETDPIAFPQDLQMDIDREPARNNQIANNRLYEDQMVPSITSTLFRVEDDETSSDLRQPLVEDGRAEVPRNVHADQEREPLHQGALPTPTSNNNNGPPPQVNIIFGLQNVDDIAESSSTSGSRGERSGGVVPVWSPSSSTFPDQFVTDEAGIGPSSSFLQRHPQSHQLVNWRRLSQTG*

Click here to download the sequence:
Link to NCBI Protein BLAST