Transcript Information: R_Transcript_43179.p2


Annotated TAIR IDAT5G53140.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21549228-21552132 | Forward length=420
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.647836063748
Replicate 235.203377943494
Replicate 343.481651604673
Condition 2: 8 Hour
Replicate 129.177767212586
Replicate 234.947246470356
Replicate 329.020838536786
Condition 3: 24 Hour
Replicate 140.829154171426
Replicate 237.771281692845
Replicate 332.372832680621


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43179.p2 GENE.R_Transcript_43179~~R_Transcript_43179.p2 ORF type:complete len:167 (+),score=54.96 R_Transcript_43179:1645-2145(+)
ATGCTACTTTCTTTTCAGGATGCTGTCTCAATTGCACTGGCAGAGGAAAAGCCTGAGGGAGCTGCAAGGAAGTTAACGGAGACTGCTTTTACTCGTGGAAGTGCTGATAATATCACCTGCATCGTGGTGAAGTTCCACCATGAGAAGACTGGATCTGCCGAAGCTCAGCTTGAGCAGCCGAAGGCAGCTGAGATCAAACGAGACCAGACCAAAGGAGCTGATCTCCATGAAGCCCATACCACAGAACTGGAGCCCCAGCCTCGACAAGACGAGGTCAAACAAGCTGAGGCCCTAAACAAACAAATCAAGGAAGCTGAGCTCCGACAAGAACAGAGAAAAGAAGCTGAACTCCGACACAAACAGAGAAAAGAAGCTGAACTCCGACACGAACAGAGCAAAGAAGCTGAGCTCCGACAAGAGCAGAGCAAAGAAGCTGAGCTTCGACGTGATCTGGAGGCCCCATTGGCTCATCTTCCTGGTGGATCATTGACATCCGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43179.p2 GENE.R_Transcript_43179~~R_Transcript_43179.p2 ORF type:complete len:167 (+),score=54.96 R_Transcript_43179:1645-2145(+)
MLLSFQDAVSIALAEEKPEGAARKLTETAFTRGSADNITCIVVKFHHEKTGSAEAQLEQPKAAEIKRDQTKGADLHEAHTTELEPQPRQDEVKQAEALNKQIKEAELRQEQRKEAELRHKQRKEAELRHEQSKEAELRQEQSKEAELRRDLEAPLAHLPGGSLTSA*

Click here to download the sequence:
Link to NCBI Protein BLAST