Transcript Information: R_Transcript_43180.p1


Annotated TAIR IDAT5G53140.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21549228-21552132 | Forward length=420
E-Value2.2E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 198.817754134167
Replicate 263.079402543792
Replicate 387.183833178459
Condition 2: 8 Hour
Replicate 164.06431044387
Replicate 271.034353090318
Replicate 380.352172875592
Condition 3: 24 Hour
Replicate 191.039580385723
Replicate 270.063473286015
Replicate 381.418487693071


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43180.p1 GENE.R_Transcript_43180~~R_Transcript_43180.p1 ORF type:complete len:464 (+),score=123.73,PP2C|PF00481.17|5.4e-65,PP2C|PF00481.17|2.1e+03 R_Transcript_43180:685-2076(+)
ATGATATGCAGCAGTCATCTAAGGAATGCCATAACTCAAACTCGAAGTATTGGAACTCTTTCCCGAAGAAGTTCATGGTTAAGAAGTGCTACATGTGTTTTGCATGACAACTTGGCCTTCACTTATCCCTGGAATTGCAAACACAGAAAGTTCAGGCCAAGTGTGAAAATGATGGTTGATACGGGTGCCACAGAGAATCGGCGTTCCATGACTGATGCCTTGCCGGAGAAAGAGGAGGATGGTGGTTATGCTAGTGGAGGATGCAATAGTGAAGATGGAAAGTTAAGCTGTGGATACTCAAGTTTTCGGGGAAAGAGAGCAAGCATGGAAGATTTCTATGATGTCAAAATGTCCAAAATCGATGGGAAGACTGTCTGCCTCTTTGGAATTTTTGATGGTCATGGTGGTTCTCGTGCAGCGGAGTACTTGAAGAGACACCTTTTTGAAAATCTTACAAAGCATCCACTATTTATGACGGACACAAAACTCGCTATAAGTGAAACATACAAACAAACTGATATGGACTTCTTGGATGCCGAAAAGGATACTTGCAGGGATGATGGATCAACAGCTTCAACAGCGGTACTTGTTGGAAACCATCTTTACGTAGCTAATGTTGGAGATTCACGAACAGTAATATCAAAGGCTGGAAAAGCGATACCACTTTCTGAAGATCATAAGCCAAACAGACTTGATGAACGGAAGAGAATTGAGAGTGCTGGAGGTGTTGTGATGTGGGCAGGCACATGGAGAGTTGGAGGCGTATTAGCTATGTCCCGTGCTTTTGGTAATCGCATGTTGAAGCAGTTTGTTGTTGCAGAACCTGAAATTCAGGAGCAAGAAATAAACGAGGAACTTGAATTGCTGGTCCTTGCAAGTGATGGACTTTGGGATGTTGTTCCGAACGAGGATGCTGTCTCAATTGCACTGGCAGAGGAAAAGCCTGAGGGAGCTGCAAGGAAGTTAACGGAGACTGCTTTTACTCGTGGAAGTGCTGATAATATCACCTGCATCGTGGTGAAGTTCCACCATGAGAAGACTGGATCTGCCGAAGCTCAGCTTGAGCAGCCGAAGGCAGCTGAGATCAAACGAGACCAGACCAAAGGAGCTGATCTCCATGAAGCCCGTACCACAGAACTGGAGCCTCAGCCTCGACAAGACGAGGTCAAACAAGCTGAGGCCCTAAACAAACAAATCAAGGAAGCTGAGCTCCGACAAGAACAGAGAAAAGAAGCTGAACTCCGACACGAACAGAGCAAAGAAGCTGAGCTCCGACAAGGGCAGAGCAAAGAAGCTGAGCTCCGACAAGAGCAGAGCAAAGAAGCTGAGCTTCGACGTGATCTGGAGGCCCCATTGGCTCATCTTCCTGGTGGATCATTGACATCCGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43180.p1 GENE.R_Transcript_43180~~R_Transcript_43180.p1 ORF type:complete len:464 (+),score=123.73,PP2C|PF00481.17|5.4e-65,PP2C|PF00481.17|2.1e+03 R_Transcript_43180:685-2076(+)
MICSSHLRNAITQTRSIGTLSRRSSWLRSATCVLHDNLAFTYPWNCKHRKFRPSVKMMVDTGATENRRSMTDALPEKEEDGGYASGGCNSEDGKLSCGYSSFRGKRASMEDFYDVKMSKIDGKTVCLFGIFDGHGGSRAAEYLKRHLFENLTKHPLFMTDTKLAISETYKQTDMDFLDAEKDTCRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRLDERKRIESAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEQEINEELELLVLASDGLWDVVPNEDAVSIALAEEKPEGAARKLTETAFTRGSADNITCIVVKFHHEKTGSAEAQLEQPKAAEIKRDQTKGADLHEARTTELEPQPRQDEVKQAEALNKQIKEAELRQEQRKEAELRHEQSKEAELRQGQSKEAELRQEQSKEAELRRDLEAPLAHLPGGSLTSA*

Click here to download the sequence:
Link to NCBI Protein BLAST