Transcript Information: R_Transcript_43208.p1


Annotated TAIR IDAT3G45630.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16748751-16753190 | Reverse length=989
E-Value1.5E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.59476275743
Replicate 27.3792822822329
Replicate 310.674984510828
Condition 2: 8 Hour
Replicate 19.5328464503353
Replicate 212.439597373786
Replicate 319.173740150467
Condition 3: 24 Hour
Replicate 116.204199858778
Replicate 211.049042317998
Replicate 315.61889606298


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43208.p1 GENE.R_Transcript_43208~~R_Transcript_43208.p1 ORF type:complete len:1030 (+),score=207.32,zf-RING_4|PF14570.2|1.1e-20,RRM_1|PF00076.18|2.9e-07,RRM_5|PF13893.2|4e-05 R_Transcript_43208:164-3253(+)
ATGAGCGATGAGGGTGAGAAGACCTGTCCCCTTTGTGCTGAGGAGATGGATCTGACTGATCAGCAATTGAAGCCTTGCAAATGTGGCTATGAGATTTGTGTATGGTGTTGGCATCACATCATGGACATGGCTGAGAAGGATGACACAGAGGGACGCTGCCCTGCTTGCCGTACTCCCTATGATAAGGAAAGAATTGTGGGGACAGCTGCCAAATGTGAAAGGTTGGTGGCAGAGATTAATATGGAAAAGAAGCACAAGACACAGAAATCCAAGGTTAAAACATCTGAAAGCAGGAAACAGCTAAGTAGTGTTCGTGTCATTCAGAGGAATCTTGTCTACATAGTTGGCTTACCTCTTAATCTCGCTGATGAAGATCTTCTGCAACGGAAAGAATATTTTGCCCAGTATGGCAAGGTTTTGAAGGTGTCCATTTCCCGTACTTCAGCAGGCACTATCCAACAGTTTGCCAACAATACATGTAGTGTATATATTACATATGCAAAAGAAGAGGAAGCAGTTCGTTGCATTCAGTCGGTTCATGGATTTATATTGGATGGCAGACCCTTGAGGGCGTGCTTTGGAACCACAAAGTATTGTCATGCATGGTTGCGGAATGTGCCCTGCAGCAATCCTGATTGTCTGTACTTGCATGAGATTGGTTCTCAGGAGGACAGCTTTACGAAGGATGAAATCATTTCTGCATACACCAGGAGTAGAGTTCAGCAAATTACTGGGTTTACAAATAATATGCAACGGCGCTCAGGAAATATGTTGCCTCCCCCAGCAGATGATTACTGCAATAACAGTACCCCTGTGATTGCGAAACCTGTGGTTAAAAGCTCTTCAAATAGTACGACTAGCAGTGTTACGACAAGCAACATAAGAGGCTCGCCTCCAACTACCAGTGCTGGTAGATCAGGTGCTCTTCCACCAGCAGCCTCATGGGGAGCATGTGGATCCACCTGTAATGTTGCTACTGGTAACGTAGCAAGTTCGAATGGACCTACCCAGCAGAGGGTTGAAGTAGTTAGTGGGTCGCCGGCACTTTCACCAACAATGTCTAGTGGCACACAAGCTTCTGTTTTGCCCGTCGATGGTGGAAAGAGGCATATGCCTGATGAGGAAATTCATGGGAAGCCAATTACTAATAAGCCGGAGATTTTCGATACTGTGAAACAGCATGCGGGAGTAAATTCTCAAACAAATGTCTCAGAGGTGTCTTCTGCACCTTTAGGTGCTCCAACTGTTAAGTCAGTCAGTCATCCATCTTGTCAAGCGACAACAGAGGCTAATGCTAGGCAGCATTCTTTGATGGTTGATTCTACACTCTCTATAGATTGTCAACCTTGTTCTACAGGTCTAGATGAAGGCGGGAGTTCTATTGCCAATGAAAAGACTCAGAAACTGAGTGCCGAGATATCATCTCTGAGCATTGACAGCCGACTAAGCGATAAACATTCTAATGTTATCAGACCTAATGGTTTGTGTTTAGATAACTTCCTCTCACCTGGAAGTCGAGAATTACAGAGCCATGAGTCTGAGAAACTTCAAGAACGTTCAACTCCAGTTGCTGCTACTTCCGCTGTGAGTGTCATTGATTCAGTTATTGCTTCAAATGAAGAGCATGATTGGAGATCAGACAATCAACCTCCAGCAGGACAGAATTTAACTTCTGAAACAGAAGACGATTTTGATAGTCAGAGACTTAGTGATGCTATTGTAGTCAGCCAGGCAACTGTACCTTCTTCATCCCCACTCCATCTTTTGAGCCATTTAAGGGGTCCTTTGCAGCAGCATATTGATACTGCTGGTGGAGTCAACTATACTTTAAATGCTCCAATTTTGAATAGAATGCCTGATGAAGGTCCGGTGACAAGTTTATCTGGTGGGTCAAATGGGTTCCTAGATGATTTTGTCAGCCATTCTTCAGGTCAAGGTAATTCTTGTTCTCTACTAAATCTTGGGCAAGGCAATCACATCAGAAGGTTTGAAGGTGGTCTTCCCAATGTTGACTCACAACCTACTCCAGATATGGGTGAGAGCAGTATTATAGCAAATATTTTGGACCTTGATTCATGGGATGAATCTTTGACTTCTCCTCAGAATTTGGCCAAGTTGTTGAGTGAAAATGATAAACAGGATCATCCTATCAAGTTGGCGAATCCCTGGAAAGGTCAAATCAGCAATCAGTCAAGGTTTTCGTTTGCAAGGCATGAGGAGTCCAGAAATCATTTATTTGATTTAGAGTCGTCACTGTGCAATAATACTGGTCAAGTAGCCAAGAATCCCCTATATGGACAGACATTTGTCGAAAATAGAGAACCATATCTTGATAGACTCAGCAATGGTTTTGGATTTCCTCAACGTAATATTGAGCTGTCAGAAAATTTGACAATTGGCAATTCTTTATTTTCATCCACATCTGTATCAAGATCTCAAATTTCTGCTCCCCCTGGGTTTTCTGCACCAAGTAGACCCCCACCTCCAGGTTTTCATTCCCATGAGAGAAGTGATCAATCTTTTGGCATAAAATCCGGGAACCATCTGCATGAGACTTCTTCCTTCTTGAGAAATCCTTATCAGGCATCGCCTAGTGGAAACATTGGTACTGCTAATGATATTGAATTTATGGATCCTGCAATTCTTGCGGTTGGCAAAGGGAGGCTTCCTAATGGTGCTAGCAACTCAAGCATGGACATGAGACCAATTTTTCATGTACAGACTCCCACATTTGATGTTAGGGATAACGAGTCAAGACTTCAGCTATTGATGCAAAGATCTCTCTCCCCTCATCAGAATATTAGATATACTGATGTTAGGGACAATTTTTCTCCGCCAAATGATGCCTATGGCTTCACTACAAGACATATGGAGCAGTCACAAGCTAACAATCTCCCCCCTTTTTCACAATTTACGCTTAACCAAGCCAGAAATACAGTAGTATCTAATGGCCATTGGGACAGCTGGAATGAGATTCCCCCAGCAAATGATATGGGGATTGCGGAGCTCCTTCGAAATGATAGACTGGGGTTTAACAAGTTTGGAATGACCAATTCTGGGGACTTATATAACAGGAGTTTCAGGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43208.p1 GENE.R_Transcript_43208~~R_Transcript_43208.p1 ORF type:complete len:1030 (+),score=207.32,zf-RING_4|PF14570.2|1.1e-20,RRM_1|PF00076.18|2.9e-07,RRM_5|PF13893.2|4e-05 R_Transcript_43208:164-3253(+)
MSDEGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRTPYDKERIVGTAAKCERLVAEINMEKKHKTQKSKVKTSESRKQLSSVRVIQRNLVYIVGLPLNLADEDLLQRKEYFAQYGKVLKVSISRTSAGTIQQFANNTCSVYITYAKEEEAVRCIQSVHGFILDGRPLRACFGTTKYCHAWLRNVPCSNPDCLYLHEIGSQEDSFTKDEIISAYTRSRVQQITGFTNNMQRRSGNMLPPPADDYCNNSTPVIAKPVVKSSSNSTTSSVTTSNIRGSPPTTSAGRSGALPPAASWGACGSTCNVATGNVASSNGPTQQRVEVVSGSPALSPTMSSGTQASVLPVDGGKRHMPDEEIHGKPITNKPEIFDTVKQHAGVNSQTNVSEVSSAPLGAPTVKSVSHPSCQATTEANARQHSLMVDSTLSIDCQPCSTGLDEGGSSIANEKTQKLSAEISSLSIDSRLSDKHSNVIRPNGLCLDNFLSPGSRELQSHESEKLQERSTPVAATSAVSVIDSVIASNEEHDWRSDNQPPAGQNLTSETEDDFDSQRLSDAIVVSQATVPSSSPLHLLSHLRGPLQQHIDTAGGVNYTLNAPILNRMPDEGPVTSLSGGSNGFLDDFVSHSSGQGNSCSLLNLGQGNHIRRFEGGLPNVDSQPTPDMGESSIIANILDLDSWDESLTSPQNLAKLLSENDKQDHPIKLANPWKGQISNQSRFSFARHEESRNHLFDLESSLCNNTGQVAKNPLYGQTFVENREPYLDRLSNGFGFPQRNIELSENLTIGNSLFSSTSVSRSQISAPPGFSAPSRPPPPGFHSHERSDQSFGIKSGNHLHETSSFLRNPYQASPSGNIGTANDIEFMDPAILAVGKGRLPNGASNSSMDMRPIFHVQTPTFDVRDNESRLQLLMQRSLSPHQNIRYTDVRDNFSPPNDAYGFTTRHMEQSQANNLPPFSQFTLNQARNTVVSNGHWDSWNEIPPANDMGIAELLRNDRLGFNKFGMTNSGDLYNRSFRM*

Click here to download the sequence:
Link to NCBI Protein BLAST