Transcript Information: R_Transcript_43230.p1


Annotated TAIR IDAT1G54320.1
Annotated Gene NameLEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20275732-20277793 | Reverse length=349
E-Value7.8E-188
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 181.743807849086
Replicate 267.527006526192
Replicate 375.123537130898
Condition 2: 8 Hour
Replicate 169.012034346991
Replicate 281.710657563756
Replicate 387.776376429422
Condition 3: 24 Hour
Replicate 166.028506090054
Replicate 258.602157628566
Replicate 366.483114524466


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43230.p1 GENE.R_Transcript_43230~~R_Transcript_43230.p1 ORF type:complete len:347 (+),score=38.77,CDC50|PF03381.11|2.3e-92 R_Transcript_43230:454-1494(+)
ATGAGTTCAAACGCTACATCGAGCTCGACAGCACCTGGATCAGCCGATCCCTCTTCAGCCAGAAGGAATAAACGTCCTAAGTATTCAAGGTTTACTCAACAGGAACTTCCAGCATGTAAACCTATCTTAACACCTCGATGGGTGATCTCTGCATTCATGCTTGTCAGCATTGTATTTATTCCTATTGGAGTTGCTTCTCTATTTGCGTCGCGTGATGTTGTTGAAATTGTCTACCGCTATGATGATAACTGTGTGCCAGGATCCAAGAGTGATAAGATCAAATTCATTCAGGGTTCCGCAGATAAAACCTGTATTAGGTCTCTAAATGTGTCAAAGCATATGAAGGCACCGATTTACATCTACTACCAACTTGACAACTTCTATCAGAACCATCGAAGGTATGTGAAAAGTCGTAGTGATGAGCAATTGAGGTATAACAAGAGTGCGTCTTCAGTGAGCGCATGTAAACCAGAAGATATGGCGAATGGGAAACCAATTGTTCCGTGTGGTCTGATAGCATGGAGCTTGTTCAATGACACATATAGCTTTGCCATAGGTAGCCAGAATCTTAGTGTCAACAAGAAGGATATTTCGTGGAAGAGTGATAGGGATCACAAATTTGGGAAGGATGTCTTTCCAACGAACTTTCAACAAGGAGCACTTATTGGTGGTGCTCATTTGAATGAATCAATACCTCTGAGCGAGCAAGAGGATCTCATTGTATGGATGCGAACTGCAGCTCTTCCTACTTTCAGGAAATTGTATGGTAGGATAGAGCAGGATCTGCAAGCAAACGATATCATAAAAGTAACTATGCAGAACAACTATAACACCTACAGCTTCAGTGGAAAGAAGATGCTAGTACTCTCAACCACTAGCTGGCTTGGTGGGAAAAATGATTTCCTTGGCATTGCCTATATCACTGTAGGAGGCTTGTGCTTCTTCTTGGCCATGATGTTCACTCTGATTTATCTAATCAAGCCAAGGCCACTTGGAGATCCTACTTATTTGTCCTGGAACAGAAATCCAGGAGGGCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43230.p1 GENE.R_Transcript_43230~~R_Transcript_43230.p1 ORF type:complete len:347 (+),score=38.77,CDC50|PF03381.11|2.3e-92 R_Transcript_43230:454-1494(+)
MSSNATSSSTAPGSADPSSARRNKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIVFIPIGVASLFASRDVVEIVYRYDDNCVPGSKSDKIKFIQGSADKTCIRSLNVSKHMKAPIYIYYQLDNFYQNHRRYVKSRSDEQLRYNKSASSVSACKPEDMANGKPIVPCGLIAWSLFNDTYSFAIGSQNLSVNKKDISWKSDRDHKFGKDVFPTNFQQGALIGGAHLNESIPLSEQEDLIVWMRTAALPTFRKLYGRIEQDLQANDIIKVTMQNNYNTYSFSGKKMLVLSTTSWLGGKNDFLGIAYITVGGLCFFLAMMFTLIYLIKPRPLGDPTYLSWNRNPGGR*

Click here to download the sequence:
Link to NCBI Protein BLAST