Transcript Information: R_Transcript_43240.p1


Annotated TAIR IDAT5G55530.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22494439-22495656 | Forward length=405
E-Value9.2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1100.51804192425
Replicate 273.389846362523
Replicate 387.703111074158
Condition 2: 8 Hour
Replicate 191.028470151101
Replicate 2115.94531325059
Replicate 3121.89310742996
Condition 3: 24 Hour
Replicate 1102.0346987898
Replicate 288.067874042236
Replicate 3115.72110533536


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43240.p1 GENE.R_Transcript_43240~~R_Transcript_43240.p1 ORF type:complete len:432 (+),score=102.55,C2|PF00168.26|2.2e-09 R_Transcript_43240:465-1760(+)
ATGGATTCTCCACAATCTGTTGTGTCACCATTCAAGAACCTCACTGTCAGTGGCGCTGAGCTGGAGAGGCAGAGATCTGATGTTTATGTTAGGGGTTCTGCTCAAAAGTCTAATGGAGCGGACAATAAGGGGGTGAACAATCATAACTCAGAAGACTTCATTGGTGCCCTTGATGTGTATATACATCAGGCAAGGGATATTCACAACATCTGCATTTATCATAAGCAAGATGTTTATGCTAAATTTTGCCTGACTAGTGATCCTGAAAATGCTGTATCCACCCAAACTATCAATGGTGGTGGTCAGAACCCTGTCTTCAATCAAAGTGTCAGGCTCAATGTTAGGACCGTAGAATCATCCTTAAAATGTGAGATTTGGATGCTTAGCCGTGTCAGAAACTACCTCGAAGATCAGCTACTAGGGATTGCTCTAGTGCCATTGTCAGAAGTTCTTATAAAGAACGGAAATGTGGAGAAGGAATTCATCCTTTCTTCATCAGATCTCTTCCATGCTCCAGCCGGGTTTGTCAAATTGTCTGTCTCATACTCCGGTGCTTCTCCTGATGTCATGGCGATTCCTAAGCTCCCTTCAGATGCTGAGAAAGTGGTGCAGGAAGCAGAAACTGTAGACTCAGTCGCGAGTGATTTTGACAAGATTGAGTTTCCTGACCCCAATATTGTGAATGAAAACCAAATGATGGTGTCTGAGTATTTTGGGATCTCGTGTAATAGCATTGATTCTCAAGCCACCGAGAGTTTGGTTTCATCAGATACCGAGAGTCACGAGCTTGGGGTTCGGGTTGTGGAGAGCTTCGCGGCAAACAGTGAGGAGTCCAAGCCACTTCCCAGAGCTGACTCGCCTGCTAGCAGTGTTTCGACAAATGGCTCTCCATCTGTTTGTCTTCCTACAAGTTCTCAATCTTCCGAGACTCCAGTTACTTCAAAGTCTCCAGGCCAGGAGCATGTTTCTCCTCTGAAGGATGACAAGAAAGATATCGGAGATGGTGCTGAGAGTGAGTCATCCCATGTGCACGAACCACCAAAGGAGACTTTCGTAAAGCCCCTTGTTACAGCGGATGTAGAGCCCGAGGAGAAGTTAGTGCAACAGGACATTGTGGATATGTACATGAAGAGCATGCAGCAGTTCACTGAGTCCTTAGCTAAGATGAAGCTTCCAATGGATCTCGGGTCTGATCCAGTCAAATCAGGGAACTCAAGTCCAAGCTCTGATCAGAAATCGCAGACACCCAAGAGCTCTGGATCCCGAGTGTTCTATGGTAGCAGGGCTTTCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43240.p1 GENE.R_Transcript_43240~~R_Transcript_43240.p1 ORF type:complete len:432 (+),score=102.55,C2|PF00168.26|2.2e-09 R_Transcript_43240:465-1760(+)
MDSPQSVVSPFKNLTVSGAELERQRSDVYVRGSAQKSNGADNKGVNNHNSEDFIGALDVYIHQARDIHNICIYHKQDVYAKFCLTSDPENAVSTQTINGGGQNPVFNQSVRLNVRTVESSLKCEIWMLSRVRNYLEDQLLGIALVPLSEVLIKNGNVEKEFILSSSDLFHAPAGFVKLSVSYSGASPDVMAIPKLPSDAEKVVQEAETVDSVASDFDKIEFPDPNIVNENQMMVSEYFGISCNSIDSQATESLVSSDTESHELGVRVVESFAANSEESKPLPRADSPASSVSTNGSPSVCLPTSSQSSETPVTSKSPGQEHVSPLKDDKKDIGDGAESESSHVHEPPKETFVKPLVTADVEPEEKLVQQDIVDMYMKSMQQFTESLAKMKLPMDLGSDPVKSGNSSPSSDQKSQTPKSSGSRVFYGSRAFF*

Click here to download the sequence:
Link to NCBI Protein BLAST