Transcript Information: R_Transcript_432739.p1


Annotated TAIR IDAT5G42790.1
Annotated Gene Nameproteasome alpha subunit F1
Annotated Gene Symbol(s)PAF1, ATPSM30, ARS5
Annotation TypeHomolog
Chromosome Positionchr5:17159270-17160975 | Reverse length=278
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21601137224519
Replicate 20.37271539200529
Replicate 30.40662847803821
Condition 2: 8 Hour
Replicate 10.14488677483577
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_432739.p1 GENE.R_Transcript_432739~~R_Transcript_432739.p1 ORF type:5prime_partial len:169 (+),score=9.07,Proteasome|PF00227.22|8.9e-36 R_Transcript_432739:2-508(+)
TCGGGATTAGCTGCTGATTCACGAGTATTATCAAAGTTTATGAGAACCGAGTGTTTAAACCATAAATTCGTTTTCGAGTCACCAATTCTCGCTTCTCTTTTAGTCAACAAAGTAGCAGATAAGGCACAAGTGCACACCCAAAGAGCTGGAAGTCGACCCTACGGTGTTGGTCTCCTCGTTGCTGCATATGACCATAACGGCGCTCATTTATATGAAATTTGTCCATCTGGAAATTACTTTGATTATAAATCAATTGCTATCGGAGGACGCTCTCAATCTGCTAAAACTTATCTTGAAAAACACTTTGAAAAATTTGCAGATTTAAATGCAAACGATTTAATATTACAATCACTTCACGCCTTATCCACCACCACCGGTGATGAGAAATTAACTCCAAAAAATACTGATATTTGCATTGTTGGAGAAAATCAAGAATTCCGTGTTTTATCTGAAGACGAAGTACAACAATACTTAAACACCTTAGATGGAGACCAAGATATGGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_432739.p1 GENE.R_Transcript_432739~~R_Transcript_432739.p1 ORF type:5prime_partial len:169 (+),score=9.07,Proteasome|PF00227.22|8.9e-36 R_Transcript_432739:2-508(+)
SGLAADSRVLSKFMRTECLNHKFVFESPILASLLVNKVADKAQVHTQRAGSRPYGVGLLVAAYDHNGAHLYEICPSGNYFDYKSIAIGGRSQSAKTYLEKHFEKFADLNANDLILQSLHALSTTTGDEKLTPKNTDICIVGENQEFRVLSEDEVQQYLNTLDGDQDME*

Click here to download the sequence:
Link to NCBI Protein BLAST