Transcript Information: R_Transcript_43300.p1


Annotated TAIR IDAT3G53360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19784502-19786808 | Forward length=768
E-Value1.6E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1072201416337
Replicate 24.5280853272633
Replicate 36.2633313324525
Condition 2: 8 Hour
Replicate 15.2492162338767
Replicate 26.2001931677742
Replicate 38.5049266706563
Condition 3: 24 Hour
Replicate 17.073008645249
Replicate 25.464268248885
Replicate 37.9795996547867


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43300.p1 GENE.R_Transcript_43300~~R_Transcript_43300.p1 ORF type:complete len:779 (+),score=117.25,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|0.053,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|8.9e+02,PPR_2|PF13041.2|5.4e-10,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|3,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|9.6e+02,PPR|PF01535.16|0.25,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.019,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|0.027,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.61,PPR|PF01535.16|0.00013,PPR|PF01535.16|1,PPR|PF01535.16|11,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|25,PPR|PF01535.16|3e-08,PPR|PF01535.16|2.3,PPR|PF01535.16|0.27,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|3.9e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|0.82,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|85,PPR_1|PF12854.3|4.9e+03,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|70,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|1.6e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|11,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|64,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|11,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|9.4e+03,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|3.9e+03,TPR_14|PF13428.2|5.8e+02,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|13,TPR_14|PF13428.2|1.4e+02,TPR_19|PF14559.2|52,TPR_19|PF14559.2|5.4e+02,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|71,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|3.5 R_Transcript_43300:680-3016(+)
ATGCTGAGAAAAGTGAAACCCAGGATACCATTTTTTAGTCAGGATGCATGGCCTAGCATCCAGCTTCTTCAAGTATCCAACTCTGGATCTGAGCAGGCCCGGAATGATTACATAAGCTCCCTCTGTAAGAAAAAACGATTCAGAGAAGCTCTTGAGGCCTTTGATTTGTTACTGGGAAAAAATAACTTCAAGATAAATCATAGCACATATGCTCTTCTCTTCTCTGCTTGCTCCTCTCTCAGAGCCTTAGAATATGGTAAGAAGGTTCATACCCATCTTCTCAGGAACAACTGTATGCCAGATGTTATTCTTCAGAACCACTTAATCAACATGTATGGTAAATGCAGATCCATGAAAGATGCCCGTGAGGTTTTTGATGCCATGTATGATAGGAATTCAGTGTCTTGGACATCATTGATAGCTGGATACTCTCAAAATCAACAAGAAGGCACTGCAATGGAACTTTTCTTTGAAATGCTATGTTCTGGATTCATACCTGACCAATATACTCTTGCAAGCATCATAAAGGCTTGCACGAGTGTTGGTGATGTCAATTTGGGAAGACAACTACATGCTCATGTACTTGAATTGAATTCCCATTCCTCTCTCATTGCATACAATGCTCTGATTTCCATGTATATGAAGTTTGAACAAATAATTGAAGCATCAACTGTGTTTTCTCGGATTTCGAGCAAGGATTTGACATCATGGGGTTCAATGATATCTGGGTTGTCACAACTTGGTTATGAAATGGAATCTTTGCATTGTTTTAAAGAAATGCTCCATAGTGTTTCCTTCCAGCCCAATGAATTCATCTTTGGCAGCATTATTAATTCTTGTAGCAGTCTTCTCGAGCCTGATTGTGGAAGACAGATACATGGGGTTTGTATCAAAAATGGATTCGGGGATGATATGTTTGTTGGATGCTCTCTTACTGACATGTATGCAAAGTGTGGTTTTCTAGATTCTGCTAAAGATATGTTTAACAAAATAATATGTCCTGATATAGTTTCTTGGAATGCAATTATTACCGGGCTTGCTTATGGTGGAAATGCCAGTGAAGCATTGACGTTTTTCCATAGGATGAGGTCTGTAGGGCTGTCTCCAGATGAAATAACAGTTCGATCCTTACTCTGTGCCTGCACTAGTCCGTCAGTAATTATTACAGGGGAGCAGTTTCACTCCTATATTATCAAGACGGGCTTGAATGTTAATATTTCTGTGTGCAACACTCTGCTGACAATGTATATGAAGTGTTCTTCTCTAGATGACGTGTATAATATGTTCAAAGAGTTCAAAGGGGAAGCAGATTTGATTTCTTGGAACCTACTTCTCACAGCATGCTTGCTACACTGTCAGGCTGAGCGGGTTTTCTGCCATTTCAATGAGATGAGTATTTATAATCATAAGCCTGATTATATTGCATTAACTAATCTGCTCAAAGCTTATTCTCAAATGACCTCTCTAGATATAGGCAAACAAGTGCATGCCTATGCACTAAAAGTTGGGCTTGAGCTTGACTTTTGTGTTACAAATGGATTACTTGACCTGTACGCGAAGTGCGGTGCACTCAGAAGTGCTCGCATTCTGTTTGACTCTATTGGAAGTACCAACACTGTCCTGTGGAGTACACTGATTCTTGGATATGCTCAGTCCGGAGACGGAGAGGAAGCTCTTAAACTCTTTAAGAGAATGATTAGTCTAGGCGTTCAGCCAAATGAAGTTACGTTTATCGGTGTGTTGACTGCTTGTAGTCACACTGGGCTGGTTGAAGAAGGATGGCAATATTACAAGACCATGGAAATGAGGCACGGAATAGTTCCAACAAGAGAACATTGTTCGTGTTTGATTGATATGCTTGCCCGTGCTGGACAGTTAAGGGAAGCTGAGGCTTTTATTCGACAATTAACTTTGGAGCCTGACATTGTGGTATGGAAGACATTGCTTTCTGCCTGTAGAACCTATGGAGATGTCCGAATTGGGAAATGGGCAGCAGAAAACGTATTGAAACTTGATCCCTTTAATTCTACTGCATATGTTCTTCTTTGTAATATATATGCTGGTGAAGGAAACTGGGAAGATTTTGCCAGAATGAGAAGCTTGATGAAAAGTAATGGTGTGAGGAAAGTCCCTGGTCAGAGTTGGATTGAAGTCCAGAATAAGATTTGTGTTTTTTCTGTGAAAGATGTTACGCATGCGGAAACAAGTAATATATATTCCGCATTGGAGTATCTGTACTTGGAGATGCTGGATGCCGGCTATCTATCTGGGAAAGGGAGCTTGTTCAAAAGTTTGCACCAGGGACTGAAAGAAGAAGAAAGCTGTTCAGAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43300.p1 GENE.R_Transcript_43300~~R_Transcript_43300.p1 ORF type:complete len:779 (+),score=117.25,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|0.053,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|8.9e+02,PPR_2|PF13041.2|5.4e-10,PPR_2|PF13041.2|0.92,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|3,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|9.6e+02,PPR|PF01535.16|0.25,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.019,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|0.027,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.61,PPR|PF01535.16|0.00013,PPR|PF01535.16|1,PPR|PF01535.16|11,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|25,PPR|PF01535.16|3e-08,PPR|PF01535.16|2.3,PPR|PF01535.16|0.27,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|3.9e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|0.82,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|85,PPR_1|PF12854.3|4.9e+03,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|70,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|1.6e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|11,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|64,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|11,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|9.4e+03,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|4.8e+03,TPR_14|PF13428.2|3.9e+03,TPR_14|PF13428.2|5.8e+02,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|13,TPR_14|PF13428.2|1.4e+02,TPR_19|PF14559.2|52,TPR_19|PF14559.2|5.4e+02,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|71,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|3.5 R_Transcript_43300:680-3016(+)
MLRKVKPRIPFFSQDAWPSIQLLQVSNSGSEQARNDYISSLCKKKRFREALEAFDLLLGKNNFKINHSTYALLFSACSSLRALEYGKKVHTHLLRNNCMPDVILQNHLINMYGKCRSMKDAREVFDAMYDRNSVSWTSLIAGYSQNQQEGTAMELFFEMLCSGFIPDQYTLASIIKACTSVGDVNLGRQLHAHVLELNSHSSLIAYNALISMYMKFEQIIEASTVFSRISSKDLTSWGSMISGLSQLGYEMESLHCFKEMLHSVSFQPNEFIFGSIINSCSSLLEPDCGRQIHGVCIKNGFGDDMFVGCSLTDMYAKCGFLDSAKDMFNKIICPDIVSWNAIITGLAYGGNASEALTFFHRMRSVGLSPDEITVRSLLCACTSPSVIITGEQFHSYIIKTGLNVNISVCNTLLTMYMKCSSLDDVYNMFKEFKGEADLISWNLLLTACLLHCQAERVFCHFNEMSIYNHKPDYIALTNLLKAYSQMTSLDIGKQVHAYALKVGLELDFCVTNGLLDLYAKCGALRSARILFDSIGSTNTVLWSTLILGYAQSGDGEEALKLFKRMISLGVQPNEVTFIGVLTACSHTGLVEEGWQYYKTMEMRHGIVPTREHCSCLIDMLARAGQLREAEAFIRQLTLEPDIVVWKTLLSACRTYGDVRIGKWAAENVLKLDPFNSTAYVLLCNIYAGEGNWEDFARMRSLMKSNGVRKVPGQSWIEVQNKICVFSVKDVTHAETSNIYSALEYLYLEMLDAGYLSGKGSLFKSLHQGLKEEESCSEY*

Click here to download the sequence:
Link to NCBI Protein BLAST