Transcript Information: R_Transcript_433045.p1


Annotated TAIR IDAT1G73030.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)VPS46.2, CHMP1A
Annotation TypeHomolog
Chromosome Positionchr1:27473938-27474848 | Forward length=203
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12416980241305
Replicate 20.28566395124215
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.15617555937214
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_433045.p1 GENE.R_Transcript_433045~~R_Transcript_433045.p1 ORF type:internal len:147 (+),score=30.03,Snf7|PF03357.17|2e-08 R_Transcript_433045:3-440(+)
AAAATCTATGCAGAAAATGCTATAAGAAGCAAGAATCAAGCTTTGAATTACTTGAGACTCGCATCAAGAATCGATGCTGTCGCAAATAGGGTCGAAACTGCTGTTAGAATGAATCAAGTCACCAAGAGTCTTGCAGGAATTACAAACGGAATGGACCAAGTTCTTAAAACTATGGATACCGAAAAGATTACCAAATTGATGGACAAATTTGACACTCAATTTCAAGATCTTGATGTCCAATCTTCTTACATGGAAAGTTCTATGCAAAGTTCTGTCTCCTCAATGACCCCTGTTGATCAAGTTGATTCTTTGATCTCCCAAGTGGCAGAGGAAAATGGACTCGAACTTCAACAACAATTGGATCCTGTTCCTAATCATTCTAACCAAGTCAAGATTGAACAAAAAGATGATCTCTCCTCAAGATTGGAGAAGTTAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_433045.p1 GENE.R_Transcript_433045~~R_Transcript_433045.p1 ORF type:internal len:147 (+),score=30.03,Snf7|PF03357.17|2e-08 R_Transcript_433045:3-440(+)
KIYAENAIRSKNQALNYLRLASRIDAVANRVETAVRMNQVTKSLAGITNGMDQVLKTMDTEKITKLMDKFDTQFQDLDVQSSYMESSMQSSVSSMTPVDQVDSLISQVAEENGLELQQQLDPVPNHSNQVKIEQKDDLSSRLEKLK

Click here to download the sequence:
Link to NCBI Protein BLAST