Transcript Information: R_Transcript_433109.p1


Annotated TAIR IDAT5G48150.1
Annotated Gene NameGRAS family transcription factor
Annotated Gene Symbol(s)PAT1
Annotation TypeOrtholog
Chromosome Positionchr5:19522497-19524053 | Reverse length=490
E-Value1.8E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6306679815455
Replicate 20.30254035181986
Replicate 30.46209557110394
Condition 2: 8 Hour
Replicate 10.49395116608276
Replicate 20.9666087251233
Replicate 32.3539552677735
Condition 3: 24 Hour
Replicate 10.86009076069209
Replicate 21.2711964778431
Replicate 31.7661548450522


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_433109.p1 GENE.R_Transcript_433109~~R_Transcript_433109.p1 ORF type:3prime_partial len:347 (-),score=86.59,GRAS|PF03514.10|2.8e-80 R_Transcript_433109:3-983(-)
ATGGTGGGGGGACGACGATCAGGGAAGGAAGGTCAGAGTGAGAAACGTCACAAGGGTATGGAACAACAGAGATCACATTGTCATACAGTCCAGTCATCATCTGCAATGGTGGGGGGACGACGATCAGGGAAGGAAGGTCAGAGTGAGAAACGTCACAAGGGTATGGAACAACAGCAACAATCAGTGCAACTCAGCTTGCCACCTGGCAATTTGAAACAGCTGTTGATTGAATGTGCAAGGGCCTTATCTGAGAACCGAGTAGATGATTTTGAGAAGTTAGCTGAAAAGGTGAGGGGGGAGGTCTCAATCTCTGGAGAGCCAATCCAGCGTCTTGGTGCTTACATGCTCGAAGGTTTAGTCGCAAGGAAGGAGTCTTCAGGAGCCAACATCTACAAGGCTCTCAGGTGTAAAGAGCCTCTCGGCAAGGACCTACTCTCATTCATGCACATCCTTTATGAAATATGCCCGTACTTGAAGTTTGGTTACATGGCTGCGAATGGAGCAATTGCTGAAGCCTGCAGAAATGAGGACAGGATACATATCATCGATTTCCAGATTGCACAGGGGACTCAGTGGTTGACGCTGCTGCAAGCACTAGCTGCAAGGCCGAGTGGACCTCCGACTGTGAGAATCACAGGCATTGACGATCCTGTTTCAAAGTATGCTCGGGGAGCAAGCTTGGATGCTGTTGGGAAGAGGCTGGCAGCTCTCTCTGAGAAACACAAAATACCAGTCGAGTTCAATGCAGTGCCTGTGTTTGGACCTGATGTTACGCGAGAAATGCTTGATATTCGACCAGGGGAAGCTCTAGCTGTGAACTTCCCTTTGCAGCTCCACCATACCCCTGACGAGAGTGTTGATGTGAACAATCCAAGGGACGAGCTTCTCAGGATGGTGAAATCACTAGTTCCTAAGGTGATCACATTGGTTGAGCAAGAGTCCAACACCAACACCACCCCTTTCTTGACGAGGTTCATAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_433109.p1 GENE.R_Transcript_433109~~R_Transcript_433109.p1 ORF type:3prime_partial len:347 (-),score=86.59,GRAS|PF03514.10|2.8e-80 R_Transcript_433109:3-983(-)
MVGGRRSGKEGQSEKRHKGMEQQRSHCHTVQSSSAMVGGRRSGKEGQSEKRHKGMEQQQQSVQLSLPPGNLKQLLIECARALSENRVDDFEKLAEKVRGEVSISGEPIQRLGAYMLEGLVARKESSGANIYKALRCKEPLGKDLLSFMHILYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWLTLLQALAARPSGPPTVRITGIDDPVSKYARGASLDAVGKRLAALSEKHKIPVEFNAVPVFGPDVTREMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDELLRMVKSLVPKVITLVEQESNTNTTPFLTRFIE

Click here to download the sequence:
Link to NCBI Protein BLAST