Transcript Information: R_Transcript_433176.p1


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value5E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.50249172676821
Replicate 30.40790136225589
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_433176.p1 GENE.R_Transcript_433176~~R_Transcript_433176.p1 ORF type:3prime_partial len:89 (+),score=18.30,HMG_box|PF00505.15|7.8e-25,HMG_box_2|PF09011.6|2.3e-16 R_Transcript_433176:38-301(+)
ATGCCTCGCGCCGCTGGTTCATCCAAGAAAGCAGCGAAAGATCCAAATGCACCTAAGCGACCATTGTCTGCATTTTTCCTTTTTTCACAAGACGAACGACCAGACATAAAGAAGAAGAGTCCATCATTATCCGTTGGTGATATTTCCAAAGAAATCGGCTCAAGATGGAAAAAAGTCAGTGACGACGTTCGCAAACGCTATGAACAAAAGGCTGCTGATGAGAAAAAGAAGTATGAAGTACGCGTTGCTGAATACAAGAAAAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_433176.p1 GENE.R_Transcript_433176~~R_Transcript_433176.p1 ORF type:3prime_partial len:89 (+),score=18.30,HMG_box|PF00505.15|7.8e-25,HMG_box_2|PF09011.6|2.3e-16 R_Transcript_433176:38-301(+)
MPRAAGSSKKAAKDPNAPKRPLSAFFLFSQDERPDIKKKSPSLSVGDISKEIGSRWKKVSDDVRKRYEQKAADEKKKYEVRVAEYKKS

Click here to download the sequence:
Link to NCBI Protein BLAST