Transcript Information: R_Transcript_433229.p1


Annotated TAIR IDAT5G26780.3
Annotated Gene Nameserine hydroxymethyltransferase 2
Annotated Gene Symbol(s)SHM2
Annotation TypeOrtholog
Chromosome Positionchr5:9418299-9421725 | Forward length=533
E-Value6.3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.63625152776661
Replicate 30
Condition 2: 8 Hour
Replicate 10.49466393832819
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_433229.p1 GENE.R_Transcript_433229~~R_Transcript_433229.p1 ORF type:internal len:99 (+),score=21.23,SHMT|PF00464.15|1.5e-40 R_Transcript_433229:1-294(+)
GGTTCACCTGCTAATTTTGAGGTCTTCACTGCATTGGTTGGTCCAGGAGGAAGAATCATGGGTTTGGACTTGCCAAGTGGAGGACATTTATCCCATGGATACAGAACCAAGCAGAAATCAATATCTGCAGTTTCCACATACTTCTCAACCATGCCATACACCCTGAATTCCACCACAGGATATGTTGATTATGATCAATTGGAAAAGAATGCCTCTCTTTTCCATCCTCAAATCATAATTGCAGGGGGAAGTGCTTATCCAAGAGACTGGGATTACAAGAGAATGAGACAAATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_433229.p1 GENE.R_Transcript_433229~~R_Transcript_433229.p1 ORF type:internal len:99 (+),score=21.23,SHMT|PF00464.15|1.5e-40 R_Transcript_433229:1-294(+)
GSPANFEVFTALVGPGGRIMGLDLPSGGHLSHGYRTKQKSISAVSTYFSTMPYTLNSTTGYVDYDQLEKNASLFHPQIIIAGGSAYPRDWDYKRMRQI

Click here to download the sequence:
Link to NCBI Protein BLAST