Transcript Information: R_Transcript_433279.p1


Annotated TAIR IDAT2G42920.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:17858705-17860384 | Forward length=559
E-Value2E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65422799120856
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.087762956800162
Replicate 20.080146529896723
Replicate 30.13011907254758
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15690110886665


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_433279.p1 GENE.R_Transcript_433279~~R_Transcript_433279.p1 ORF type:5prime_partial len:279 (+),score=51.53,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.00084,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|3.8,PPR|PF01535.16|0.0044,PPR|PF01535.16|0.66,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|2.8e+03,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|0.88,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|8.5,PPR_2|PF13041.2|4.6e+02,PPR_2|PF13041.2|9e+02,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|9.9,PPR_3|PF13812.2|33,PPR_3|PF13812.2|4.7e+02,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|56,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|1.5e+02 R_Transcript_433279:1-837(+)
AATGCTTGTGCTAATCTTGGATCCCTTGAGCAAGGGGAATGGATTTATCATTACATATGCAAATATAAGTTTGAACTCAACGCCATTATGGTTACTGCAATTGTGGACATGTATTGCAAGTGCGGTGACATTGAGAAGGCGCGTCGAGTATTTGAGACAATCCCAATTAAAGGCTTGTCATGTTGGAACTCTATGATTTTGGGATTAGCCAATCATGGTCATGAGGAAGAAGCATTGCAATTGTTCTCAGAGCTTGAATTGTCAAACATAGAACCAAATGATGTTACTTTCCTCGGACTTTTGACAGCCTGCAATTACCTTGGTAATGTCAATTTAGCTAGAGAATATTTCAAGCTAATGACCCAAAATTACAATATTGAACCATCAATTAAGCACTATAATTGCATGGTTGACATTTTAGGACAAGCTGGTTTTCTTGGTGAGGCTAGTGAACTAATAAAACATATGCCATTAGAGCCAGATGCTGTCATATGGGGTTCACTGCTCTCGGCTTGTAAGAAGTATGGAAATGTTGAGATGGCAAAATGGGCAGCAATGCATATTAGGGAAACAGGACCTAATGATAGTGCAGCTTATATACTCATATCTAATATTTATGCAGCTTCTGGCCGATTTGAGGATGCAATCAAACCGCGGATTTTGATGAAGGACAAGCAAATCTTAAAAGAGATTGGATGCAGTTCGATTGAAATCAATGGGGAAGTTCAAGAGTTTGCTTCTGGTGGAAATTTGAATGCTCAAATGCAAGAGCTGATGATGCTTTTGCATTCTTTTTGTAAGGATGAAGATTTTCCAACACAAGAAGTAAGAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_433279.p1 GENE.R_Transcript_433279~~R_Transcript_433279.p1 ORF type:5prime_partial len:279 (+),score=51.53,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.00084,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|3.8,PPR|PF01535.16|0.0044,PPR|PF01535.16|0.66,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|2.8e+03,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|0.88,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|8.5,PPR_2|PF13041.2|4.6e+02,PPR_2|PF13041.2|9e+02,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|9.9,PPR_3|PF13812.2|33,PPR_3|PF13812.2|4.7e+02,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|56,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|1.5e+02 R_Transcript_433279:1-837(+)
NACANLGSLEQGEWIYHYICKYKFELNAIMVTAIVDMYCKCGDIEKARRVFETIPIKGLSCWNSMILGLANHGHEEEALQLFSELELSNIEPNDVTFLGLLTACNYLGNVNLAREYFKLMTQNYNIEPSIKHYNCMVDILGQAGFLGEASELIKHMPLEPDAVIWGSLLSACKKYGNVEMAKWAAMHIRETGPNDSAAYILISNIYAASGRFEDAIKPRILMKDKQILKEIGCSSIEINGEVQEFASGGNLNAQMQELMMLLHSFCKDEDFPTQEVRI*

Click here to download the sequence:
Link to NCBI Protein BLAST