Transcript Information: R_Transcript_43334.p1


Annotated TAIR IDAT1G09130.3
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2939731-2942217 | Reverse length=370
E-Value3.5E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.423474606115
Replicate 213.338075340445
Replicate 316.361955425823
Condition 2: 8 Hour
Replicate 115.629275498242
Replicate 215.292396395948
Replicate 318.537815101672
Condition 3: 24 Hour
Replicate 121.143512431594
Replicate 218.502284054101
Replicate 322.286872553528


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43334.p1 GENE.R_Transcript_43334~~R_Transcript_43334.p1 ORF type:complete len:329 (+),score=85.99,CLP_protease|PF00574.19|5.4e-42 R_Transcript_43334:141-1127(+)
ATGGCGAATTGCTTGCAGCTACCAATGGCTTCTTGCTCTTTCTCTTCTTCTTCTTCATCATCATCTTCAACAACTTCGAACAGACGAGTTTCATTCAAAACACTGAGCTCAATCACCACCAGAAATGCTGCGAAAATCCCTCTGCCTCCAGTAAGCCCTAAGGACCCCTTTCTCAAGAAACTCGCTTCAGTTGCTGCTAATTCTCCCGAAACTCTTCTTCAAAGGCCTAAGAGCTCCGATACGCCGCCGTTTTTGGATTTGTTCGAATCTCCTAAGCTCATGGCTACTCCTGCTCAAGTGGAAAGGTCTGTATCCTACAATGAGCACAGGCCAAGGAGGCCTCCACCAGATTTGCCTTCATTGCTGCTTCATGGAAGAATAGTTTACATTGGCATGCCTTTGGTTCCAGCTGTCACCGAACTTGTTGTTGCTGAATTGATGTACTTACAATGGATGGATGCCAAGGAACCTATATATATCTACATAAATTCGACTGGAACTACTCGGGATGATGGTGAAACGGTTGGGATGGAAACAGAAGGTTTTGCTATCTATGATGCAATGATGCAGCTGAAAAATGAGATACACACAGTTGCAGTAGGGGCTGCCATAGGTCAAGCATGTTTGCTTCTTTCTGCCGGAACCAAGGGGAAGAGGTTTATGATGCCACATGCTAAAGCCATGATTCAGCAGCCTCGTGTTCCTTCATCTGGGTTGATGCCAGCAAGTGATGTTGCAATTCGTGCAAAAGAGGTAATAATAAACAGGGACACCCTCGTGAAGCTCCTGGCTAAGCACACTGAAAATACAGAAGAAGCTGTTGCCAATGTGATGAGACGACCATTTTATATGGATGCAACCAGGGCTAAGGAATTTGGCGTCATAGATAGGATTCTCTGGCGAGGACAGGAAAAGATCATGGCAGATGTGGCTCCACCTGAGGATTGGGATAAGGGTGCTGGAGTTAAAGCTGTTGATGCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43334.p1 GENE.R_Transcript_43334~~R_Transcript_43334.p1 ORF type:complete len:329 (+),score=85.99,CLP_protease|PF00574.19|5.4e-42 R_Transcript_43334:141-1127(+)
MANCLQLPMASCSFSSSSSSSSSTTSNRRVSFKTLSSITTRNAAKIPLPPVSPKDPFLKKLASVAANSPETLLQRPKSSDTPPFLDLFESPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDAKEPIYIYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVAIRAKEVIINRDTLVKLLAKHTENTEEAVANVMRRPFYMDATRAKEFGVIDRILWRGQEKIMADVAPPEDWDKGAGVKAVDAI*

Click here to download the sequence:
Link to NCBI Protein BLAST