Transcript Information: R_Transcript_43339.p1


Annotated TAIR IDAT4G19710.2
Annotated Gene Nameaspartate kinase-homoserine dehydrogenase ii
Annotated Gene Symbol(s)AK-HSDH II, AK-HSDH
Annotation TypeOrtholog
Chromosome Positionchr4:10725229-10729536 | Forward length=916
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.213579379214
Replicate 230.883331693411
Replicate 333.883874843373
Condition 2: 8 Hour
Replicate 131.663634089785
Replicate 229.05519989759
Replicate 335.925848878604
Condition 3: 24 Hour
Replicate 148.039569593938
Replicate 244.43148828476
Replicate 346.300913760744


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43339.p1 GENE.R_Transcript_43339~~R_Transcript_43339.p1 ORF type:complete len:962 (+),score=193.00,Homoserine_dh|PF00742.15|2.4e-55,AA_kinase|PF00696.24|1.5e-44,NAD_binding_3|PF03447.12|5.7e-25,ACT|PF01842.21|4.1e-09,ACT|PF01842.21|3e-07,ACT_7|PF13840.2|4.2e-06,ACT_7|PF13840.2|1.8e-09 R_Transcript_43339:137-2887(+)
ATGGCGGCTTCCAATGGCCTTCTTTCCAACACATTGTATCGACCTTTTTCCAAAACCTCGACCTCTTCTTCTTCTTCTTCATCATCATTCCTTTTATTGCCTCCTTCTTCTTCTTGTTCTTCTCTCCAACCCTCTCTTTTTACCAGAAAGGTTTTGGTGTCTCAATCAGGGAAGCGATGGCCATGTTCTGGAATTCAGGCCTCGGCCAAAGCTACTACTATAGAGAGTTCGGCGGAAACTGTTAAGCTACCTAAAGGTGACATGTGGTCTGTTCATAAATTTGGGGGAACTTGTGTTGGAAGCTCTGACCGAATTGAGAATGTTGCCCAAATAGTTGTAAATGACAACTCAGAGAGGAAGTTGGTGGTAGTGTCTGCCATGTCCAAGGTCACTGATATGATGTACGACTTAATCCAAAAGGCACAATCACGGGATGATTCCTTCTTGACTGCCTTGGATGCTGTTTTAGAAAAGCACACTCTAACGGCAAAGGATCTGTTGGAGGGGGATGATCTTCTAAGTTTCTTATCAAGGTTGCATGATGATATAAACAATCTTAAGGCTATGCTTCGTGCAATCTACATAGCTGGTCATGCAACGGAATCATTTTCTGATTTTGTTGTTGGACATGGGGAGTTGTGGTCTGCACAGATGCTATCATATGTTATAAGAAAGAAAGGTTTTGATTGTACATGGATGGACACACGGGATGTCCTTGTGGTGAATCCAACTGGTTCAAATCAAGTTGACCCAGAATATTCGGAATCTGAAAGAAGACTCGACAAATGGTTCTCTAGTAACCCATCGAGGATCATTGTAGCAACTGGCTTCATAGCTAGTACCCCTCAAAACATTCCAACTACTCTGAAGAGGGATGGAAGTGACTTTTCTGCGGCTATAATGGGTGCTCTTTTTAGAGCTAATCAAGTTACGATCTGGACAGATGTTGATGGTGTCTACAGTGCAGATCCGAGAAAAGTGAGTGAAGCTGTGATACTGAAAACATTGTCATATCAAGAGGCTTGGGAGATGTCATACTTTGGGGCAAATGTATTGCATCCTCGGACCATCATTCCTGTTATGCGGTATGACATTCCAATTGTAATCAGAAATGTTTTCAACCTCATGGCTCCTGGGACGAAGATATGTCGTCTTTCTCCTAATGAAAATGGAGACAGCATGCAGTCTCCTGTCAAAGGATTTGCAACGATAGATAATTTGGCACTTGTAAACGTTGAGGGAACCGGTATGGCTGGTGTTCCTGGTACAGCTGGTGCCATTTTCAGTGCGGTGAAGGAGGTCGGGGCTAATGTTATCATGATCTCACAGGCTAGTAGTGAGCATTCAGTATGTTTTGCTGTGCCTGAGAAGGAAGTAGATGCAGTTGCTGAAGCTTTGCGGTCAAGATTTCGTCAAGCTTTGGATGCTGGCCGTCTTTCTCAGGTTGCCATTATCCCAAACTGCAGCATTTTGGCAACAGTTGGGCAGAAGATGGCCAGTACCCCAGGAGTTAGTGCCACTCTGTTTAATGCACTAGCAAAGGCTAATATAAATATTCGAGCCATAGCACAGGGTTGTTCGGAATACAACATTACAGTGGTTGTAAAGAGGGATGATTGTATTAAAGCCCTGAGAGCTGTTCATTCCAGGTTTTATCTCTCACAGACAACAATAGCAATGGGCATCATTGGGCCAGGATTGATTGGCGGGACACTCCTTGACCAACTCCGTGACCAGGCAGCTGTATTAAAGGAGGAGTTTAACATTGACTTGCGTGTTATGGGAATTACAAGCTCAAAGAAAATGTTTCTTTCTGACTTGGGTGTTGACCTGTCTAACTGGAGAGAGCTTCAGAGTGAGCATGGACAAGTTGCAGACTTGAATAAATTTGCCCAACATATTCATGGGAATCATTTTATCCCCAATACTGTGTTAGTAGATTGTACAGCTGACTCTTACATTGCAAGCCATTATTATGATTGGTTGCGGAAAGGAATTCATATAATTACGCCGAACAAGAAGGCAAACTCCGGGCCTCTTGATCAGTATCTAAAGTTGAGAGCTCTGCAACGACAATCCTATACTCATTACTTTTATGAGGCCACTGTTGGTGCGGGTCTTCCTATTATCAGCACTCTAAGAGGTCTTCTTGAAACGGGTGACAAAATTTTGAGCATTGAGGGTATTTTCAGTGGAACTTTGAGTTACATATTCAACAAGTTCAAGGGCAAAAGAAATTTTAGTGATGTAGTGACAGAGGCAAAAGAAGCAGGTTACACTGAGCCGGATCCTAGGGACGATCTCTCTGGAACTGATGTTGCTAGAAAGGTTATAATTTTAGCTAGGGAATGTGGATTGAACCTTGAACTTTCCGATATTCCTCCTGAGAGCCTTGTGCCTGAACCATTGCGGGCTACCGCATCAGCCAAGGAATTCATGGATCAACTTCCTAAGTTTGATCAAGACTGGGGAAAGAGACTACAAGCTGCTGAGGATGCAGGGGAGGTCCTACGTTATGTTGGAGTGGTGGATGTGGTAAATCAGAAGGGACAAGTGAAGATGGGGAGTTACAAGAAGGATCACCCATTTGCTCAGCTTTCGGGATCAGATAACATCATCTTATTCACCACAGAGCGGTACAAGGAGCAACCACTGATAGTACGAGGTCCTGGTGCAGGGGCTGAAGTCACGGCTGGTGGAGTTTTCAGCGACATCTTGCGCTTGGCCTCTTACCTCGGTGCTCCTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43339.p1 GENE.R_Transcript_43339~~R_Transcript_43339.p1 ORF type:complete len:962 (+),score=193.00,Homoserine_dh|PF00742.15|2.4e-55,AA_kinase|PF00696.24|1.5e-44,NAD_binding_3|PF03447.12|5.7e-25,ACT|PF01842.21|4.1e-09,ACT|PF01842.21|3e-07,ACT_7|PF13840.2|4.2e-06,ACT_7|PF13840.2|1.8e-09 R_Transcript_43339:137-2887(+)
MAASNGLLSNTLYRPFSKTSTSSSSSSSSFLLLPPSSSCSSLQPSLFTRKVLVSQSGKRWPCSGIQASAKATTIESSAETVKLPKGDMWSVHKFGGTCVGSSDRIENVAQIVVNDNSERKLVVVSAMSKVTDMMYDLIQKAQSRDDSFLTALDAVLEKHTLTAKDLLEGDDLLSFLSRLHDDINNLKAMLRAIYIAGHATESFSDFVVGHGELWSAQMLSYVIRKKGFDCTWMDTRDVLVVNPTGSNQVDPEYSESERRLDKWFSSNPSRIIVATGFIASTPQNIPTTLKRDGSDFSAAIMGALFRANQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNVFNLMAPGTKICRLSPNENGDSMQSPVKGFATIDNLALVNVEGTGMAGVPGTAGAIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVDAVAEALRSRFRQALDAGRLSQVAIIPNCSILATVGQKMASTPGVSATLFNALAKANINIRAIAQGCSEYNITVVVKRDDCIKALRAVHSRFYLSQTTIAMGIIGPGLIGGTLLDQLRDQAAVLKEEFNIDLRVMGITSSKKMFLSDLGVDLSNWRELQSEHGQVADLNKFAQHIHGNHFIPNTVLVDCTADSYIASHYYDWLRKGIHIITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILSIEGIFSGTLSYIFNKFKGKRNFSDVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARECGLNLELSDIPPESLVPEPLRATASAKEFMDQLPKFDQDWGKRLQAAEDAGEVLRYVGVVDVVNQKGQVKMGSYKKDHPFAQLSGSDNIILFTTERYKEQPLIVRGPGAGAEVTAGGVFSDILRLASYLGAPS*

Click here to download the sequence:
Link to NCBI Protein BLAST