Transcript Information: R_Transcript_433514.p1


Annotated TAIR IDAT1G72370.1
Annotated Gene Name40s ribosomal protein SA
Annotated Gene Symbol(s)P40, AP40, RP40, RPSAA
Annotation TypeOrtholog
Chromosome Positionchr1:27243148-27244842 | Reverse length=298
E-Value8.5E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21061108793906
Replicate 20.080755001601146
Replicate 30.26430851072484
Condition 2: 8 Hour
Replicate 10.094176403643251
Replicate 20.086003391696868
Replicate 30
Condition 3: 24 Hour
Replicate 10.35319703427237
Replicate 20
Replicate 30.8418347956499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_433514.p1 GENE.R_Transcript_433514~~R_Transcript_433514.p1 ORF type:5prime_partial len:260 (+),score=15.52,Ribosomal_S2|PF00318.16|1.9e-14,Ribosomal_S2|PF00318.16|6.2e-13 R_Transcript_433514:1-780(+)
CTTCTCTGTGTCGTAATCATGTCGCTTCCCGCCGTTCTCCAAGCAAAGGAGGAGGACATCCAGAAGATGTTGGCCGCCGAGGTTCACATTGGTACCACCAATGTTGACCAGAAGATGAAGGAGTATGTCTTCAAGAGAAGATCCGATGGTATCAACATCATCAACCTGGGCAAGACCTGGGAGAAGCTGATGCTGGCTGCCAGAATCATCACTGCCATCGAGAACCCCCAGGATGTGGTCGTGATCTCTTCTCGCCCCTACGGCCAGCGCGCCGTGCTGAAGTTCTCCCAGTACACTGGTGCTCAGTGCATTGCCGGCAGATTCACCCCCGGTACTTTCACCAACCAGATCACCAAGCAGTTCAGAGAGCCCAGACTCCTGATCATCACTGACCCCAGAATCGATGCTCAGGCCGTGAAGGAGGCTTCCTACACCAACATCCCCGTCATTGCCCTGACCGACTCTGACTCCCCTTTGAAATACGTTGACGTGGCCATTCCCGGCAACAACAAGGGCCGCCTGTCCGTCGGCCTGCTGTACTGGCTGCTGGCCCGCGAAGTGCTGCGCATGCGCGGCACTATCAGCCGCAACACCGCCTGGGACGTGCCCGTGGACCTGTTCTTCTACCGCGACCCCGAAGAGCTGGAGAAGATGGAGGACGTTGCCCAGGAGAGCAACGCGATGAGCAGCTGGAACAAGGACATCGCCCAGACCGCCGAGCCCACGTACGAGGTGGTTGACGAGGCCGCCGTCGCTGCCCCCGCCGACGGCGGATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_433514.p1 GENE.R_Transcript_433514~~R_Transcript_433514.p1 ORF type:5prime_partial len:260 (+),score=15.52,Ribosomal_S2|PF00318.16|1.9e-14,Ribosomal_S2|PF00318.16|6.2e-13 R_Transcript_433514:1-780(+)
LLCVVIMSLPAVLQAKEEDIQKMLAAEVHIGTTNVDQKMKEYVFKRRSDGINIINLGKTWEKLMLAARIITAIENPQDVVVISSRPYGQRAVLKFSQYTGAQCIAGRFTPGTFTNQITKQFREPRLLIITDPRIDAQAVKEASYTNIPVIALTDSDSPLKYVDVAIPGNNKGRLSVGLLYWLLAREVLRMRGTISRNTAWDVPVDLFFYRDPEELEKMEDVAQESNAMSSWNKDIAQTAEPTYEVVDEAAVAAPADGGW*

Click here to download the sequence:
Link to NCBI Protein BLAST