Transcript Information: R_Transcript_433596.p1


Annotated TAIR IDAT3G25720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9380234-9381405 | Forward length=282
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22327780984365
Replicate 20.44946208842228
Replicate 30.14010237061867
Condition 2: 8 Hour
Replicate 10.29952128375835
Replicate 20.27352760662001
Replicate 30.44407610080457
Condition 3: 24 Hour
Replicate 10.28082944621045
Replicate 20.33723637447366
Replicate 30.13386975343668


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_433596.p1 GENE.R_Transcript_433596~~R_Transcript_433596.p1 ORF type:5prime_partial len:327 (+),score=43.62,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|5e+03,zf-RVT|PF13966.2|1.1e-14 R_Transcript_433596:2-982(+)
TTAAACTCTGTGTTATTTGGCATTGAGAACTTCTCGTGCACTGCCTTCATGTTACCAAAGAAAACTCTGATGCTTATTGAAAAGATGTGTAGAAGGTTTCTTTGGGGGATAAAAGATGATGAGAGGAAGATGCTCTTTATGGCGTGGCATAATATTTGTAAAGAGAAGAAGCAAGGGGGCTTGCATATAAAGGAGATACTTAACTGGAATAAAGCATTAATCCTCAAATGGATAGCAAAATTGCACTCAGGGGTTGATTCCCTATGGAAAGAATGGTGTCACAACTACTATCTTAAAGATAAGAGGTTTTGGGAGATCAAATCCAGAAAAGTGGACTCTTGGGCTTGGAGAAAATTGCTCAATGTTAGATATGAGTTCACAGCAATGGTTGGAAATACCAGGGCTGTAGAACTGCTACAAGGATGGGCAGACACTGGCAAAGTAACTGGACGTGCCTATAGGATCTTCCGAGGTGATATGCCAAAGAGGATATGGGTGTCTATAGTTTGGGATCAGGTGATCATGCCAAAATACTCAATTATTGCTGTCATGGCTCTATCCAATGGCCTTCCCAGTCAAGCAAACATACAGAAGAGAGGAATGTTTATTGTAAATAGATGTATTCTCTGCTGCAATCACCAGGAGGATGTTGATCATCTGTTCTTCATCTGTTCTTACTTTAATCAGGTATGGAGAAAGGTGCTAAATTGGATAAGAGTTTATAGGAGAGGTCTGAGTCTTAAGGGTGAGATGAAATGGTTCAAGAAATTTGTGAAGGGATGTCGCTGGGACAAAAAGCTCAAGAGATGTGCTCTCTTAACTACCATCTATAAGCTTTGGAAGGACAGGAATACTAGGACCTTTGAAGACAAAAGCAGAGATGAACAACAGCTGTTTCATAAGATCAAATTCAATGTTGCAACTAGAATGTTGAATGTAGAGGGCTTAACTTCGGATAGTAAGACTACTTTCTTACTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_433596.p1 GENE.R_Transcript_433596~~R_Transcript_433596.p1 ORF type:5prime_partial len:327 (+),score=43.62,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|5e+03,zf-RVT|PF13966.2|1.1e-14 R_Transcript_433596:2-982(+)
LNSVLFGIENFSCTAFMLPKKTLMLIEKMCRRFLWGIKDDERKMLFMAWHNICKEKKQGGLHIKEILNWNKALILKWIAKLHSGVDSLWKEWCHNYYLKDKRFWEIKSRKVDSWAWRKLLNVRYEFTAMVGNTRAVELLQGWADTGKVTGRAYRIFRGDMPKRIWVSIVWDQVIMPKYSIIAVMALSNGLPSQANIQKRGMFIVNRCILCCNHQEDVDHLFFICSYFNQVWRKVLNWIRVYRRGLSLKGEMKWFKKFVKGCRWDKKLKRCALLTTIYKLWKDRNTRTFEDKSRDEQQLFHKIKFNVATRMLNVEGLTSDSKTTFLL*

Click here to download the sequence:
Link to NCBI Protein BLAST