Transcript Information: R_Transcript_43377.p1


Annotated TAIR IDAT5G19570.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6606739-6607152 | Forward length=137
E-Value5.6E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6021348134089
Replicate 28.338956193707
Replicate 37.7980383306051
Condition 2: 8 Hour
Replicate 15.9043929660024
Replicate 26.1849247645832
Replicate 33.7333099857533
Condition 3: 24 Hour
Replicate 17.9782450649468
Replicate 27.8210137909849
Replicate 32.9494070145465


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43377.p1 GENE.R_Transcript_43377~~R_Transcript_43377.p1 ORF type:complete len:141 (+),score=15.69,TMEM234|PF10639.5|2.7e-26 R_Transcript_43377:126-548(+)
ATGGCAATCAACGACATAGAGAAGATTATAGCGGTTGGCCTAATATGGGGAGCCACAAACGCACTCATGAAAAAAGGAGCAATCGTTTGGGACCAAACCCTCAAATCCTTGCAATCCAAACAAAAACAACCCTCTTCTTCACTTCCCCTTCCTCATCGCATATTAATCTCTCTTCAAAACTACCTAAACCTGATCTTAACATGGCAATACTCAGTCCCTCTAATTCTCAATCTCTCAGCTTCAGCCACCTTCTTTGCCATTCTGGGTCACACCCCAATCTCACTGGCTGTCCCTGTCACCAATGCGACGACGTTTGCTGCTACTGCTGTTGTGGGTATGCTTCTTGGTGAAGAGACTCGCGTTGGGTTTGCCTTGTTTGGGGCTATTCTTATTGTTTTGGGGGTTTGGCTTTGTGTCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43377.p1 GENE.R_Transcript_43377~~R_Transcript_43377.p1 ORF type:complete len:141 (+),score=15.69,TMEM234|PF10639.5|2.7e-26 R_Transcript_43377:126-548(+)
MAINDIEKIIAVGLIWGATNALMKKGAIVWDQTLKSLQSKQKQPSSSLPLPHRILISLQNYLNLILTWQYSVPLILNLSASATFFAILGHTPISLAVPVTNATTFAATAVVGMLLGEETRVGFALFGAILIVLGVWLCVM*

Click here to download the sequence:
Link to NCBI Protein BLAST