Transcript Information: R_Transcript_43393.p1


Annotated TAIR IDAT1G60390.1
Annotated Gene Namepolygalacturonase 1
Annotated Gene Symbol(s)PG1
Annotation TypeOrtholog
Chromosome Positionchr1:22247611-22249556 | Reverse length=624
E-Value7.4E-282
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.44622595862
Replicate 223.604931680141
Replicate 329.744051696822
Condition 2: 8 Hour
Replicate 119.21769400405
Replicate 220.463594897085
Replicate 319.306713114412
Condition 3: 24 Hour
Replicate 133.184466810954
Replicate 223.458775365432
Replicate 328.420852904047


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43393.p1 GENE.R_Transcript_43393~~R_Transcript_43393.p1 ORF type:complete len:660 (+),score=12.57,BURP|PF03181.11|2.7e-60 R_Transcript_43393:83-1981(+)
ATGAATAAACCAGAACTGCAGCTTATCAGCTCCTCTTTCCTTTTATTTTTCTTCTTCCTGCTCTTATCCTCCAATGTTAATATTGCGGTAGGAAGGGGGACATCAGGGGAGAACCCGTTTACGCCGAAAGCATCCGCGATCCGGTACTGGAACAACCGGATCTACAAGGTGCCCCGGCCCGAGTTCCTCTTGAAGAAGACCTCCCCCTTGACGGCTTCCGACTCGGCCCGTTTCGCCCAGTTGGTGTCCCAGAACTCGCTCTCGGCCCATCTCGACTCCTTCTGCAAGTCGGCCCAGCTCTTCTGCTTCCCTGACCCGGCCCAGAGTCTCGAGAAGCACACCACCGACTCCAGCTTCGCCACCTACTCCGACAAGAACTTCACCAACTACGGGTCGGGCCGGGCCGGGGGAAAGGACACCTTCAAGGAGTACTCCAAGGACAACAACCTCCCCGTCAACTCGTTCCGGAGGTACAGCCGTGACTCGGCGGGTCACAAGGACGAGTTCACTAATTACGCCAACGACGGCAACGTCGTGTCGCAGGACTTCCACACCTACGGCGCCAGCGCCACCGGAGGCGGCGGAGCTTTCACCACCTACGCCGCCAACGTCAACGCCCCGGGGTTGAAGTTCACATCCTACTCCGACGAAGGCAATGGCCGAAAACAGACCTTCACCTCCTACTCCCCGGAGGCCAATGCCGGCGACCAGGGTTTCGCTAACTACGGTAAGAACGGCAACGGGTTGACAAACAACTTCAAGGAGTACGGCAAGGACACCAATGTCGTGGGGTCCACCTTCGCCGGCTACTCCAAGACCGGCAATGGAGGATCCGACACCTTCACGTCGTATGGTTTCAACGGCAATGTCCCCCAGGACAAGTTCAAGGGGTACGGCGAAGGTGGCAATGCCGGTGTCGAGAGCTTCTCCAGCTACAGAGACCAATCCAATGTCGGAGACGATAGCTTCCAGTCCTACGGCAAGGGGTCCAACAACGAGAAGGTGAAGTTCGATAACTATGGTGAGAGCTTCAACCAGGGTTCCGATAACTTCACCGCCTATGGTCAGGATGCGGAGGGCCAGAAGATTGAGTTCAAAGGGTACGGCCGAGGGACCGATTTCAAGAAGTATTCCAAAGACGGCGTCACCTTCAAGGACTACAAGAATGGCAGCGTTAGTGAGAGCGGAGTTACGACAATGGAGGTTGAGGGTAAAGTGGTAAAAAACAAGTGGATTGAGCCGGGGAAGTTTTTCAGAGAAAGAATGTTGAAGGAAGGGACAGTGATGCCAATGCCGGATATTCAAGATAAGATGCCACCGAGGTCGTTCTTACCAAGATCAATTGTGTCCAAAATACCCTTCGCTTCTTCACAAATTTCCCAACTCAAGGACATGTTTCACGCCTTTGATAATTCCTCTATGGAGAGCATCCTAAACGCTGCGTTGCACGAGTGCGAGCGGGTCCCCAGCCAGGGCGAGACCAAGAAGTGTGTGGGGTCCCTCGAGGATATGATCGACTTTGCCGTCTCGGTCTTGGGCCGGGCCTCTGAGCCCCGCTCCACTTTGAATGTTAACGGGTCCAAGAAAAACATCTTGATTGGTAAGGTTAGAGGGATCAATGGTGGCAATGTCACTCACTCCGTCTCGTGTCACCAGAGCTTGTATCCGTATTTGCTTTACTATTGTCATTCGGTCCCTAAGGTTCGGGTCTACGAAGCTGATATATTGGATCCGGACACCAAATCCAAGATCAACCATGGTGTTGCTATCTGTCACTTGGACACGTCCGTGTGGAGCTCGACCCACGGGGCGTTTCTTGCACTCGGACCGGGTCCGGGTAAGATTGAGGTTTGTCATTGGATTTTTGAGAATGATTTAACTTGGACAATTGCTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43393.p1 GENE.R_Transcript_43393~~R_Transcript_43393.p1 ORF type:complete len:660 (+),score=12.57,BURP|PF03181.11|2.7e-60 R_Transcript_43393:83-1981(+)
MNKPELQLISSSFLLFFFFLLLSSNVNIAVGRGTSGENPFTPKASAIRYWNNRIYKVPRPEFLLKKTSPLTASDSARFAQLVSQNSLSAHLDSFCKSAQLFCFPDPAQSLEKHTTDSSFATYSDKNFTNYGSGRAGGKDTFKEYSKDNNLPVNSFRRYSRDSAGHKDEFTNYANDGNVVSQDFHTYGASATGGGGAFTTYAANVNAPGLKFTSYSDEGNGRKQTFTSYSPEANAGDQGFANYGKNGNGLTNNFKEYGKDTNVVGSTFAGYSKTGNGGSDTFTSYGFNGNVPQDKFKGYGEGGNAGVESFSSYRDQSNVGDDSFQSYGKGSNNEKVKFDNYGESFNQGSDNFTAYGQDAEGQKIEFKGYGRGTDFKKYSKDGVTFKDYKNGSVSESGVTTMEVEGKVVKNKWIEPGKFFRERMLKEGTVMPMPDIQDKMPPRSFLPRSIVSKIPFASSQISQLKDMFHAFDNSSMESILNAALHECERVPSQGETKKCVGSLEDMIDFAVSVLGRASEPRSTLNVNGSKKNILIGKVRGINGGNVTHSVSCHQSLYPYLLYYCHSVPKVRVYEADILDPDTKSKINHGVAICHLDTSVWSSTHGAFLALGPGPGKIEVCHWIFENDLTWTIAD*

Click here to download the sequence:
Link to NCBI Protein BLAST