Transcript Information: R_Transcript_434187.p1


Annotated TAIR IDAT3G12500.1
Annotated Gene Namebasic chitinase
Annotated Gene Symbol(s)ATHCHIB, PR3, PR-3, CHI-B, B-CHI, HCHIB
Annotation TypeOrtholog
Chromosome Positionchr3:3962501-3963984 | Reverse length=335
E-Value4.6E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.899496431906
Replicate 224.837894814233
Replicate 325.074567652571
Condition 2: 8 Hour
Replicate 139.9343601821
Replicate 239.572412343549
Replicate 341.342154157474
Condition 3: 24 Hour
Replicate 124.044138799993
Replicate 212.732215700239
Replicate 326.651905391616


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_434187.p1 GENE.R_Transcript_434187~~R_Transcript_434187.p1 ORF type:5prime_partial len:317 (+),score=29.69,Glyco_hydro_19|PF00182.15|5.6e+03,Glyco_hydro_19|PF00182.15|5.8e-131,Chitin_bind_1|PF00187.15|3.5e-15,Chitin_bind_1|PF00187.15|3.5e+03,Chitin_bind_1|PF00187.15|1.6e+04,Chitin_bind_1|PF00187.15|9e+03 R_Transcript_434187:1-951(+)
GGGAAAATCACAACACTAACATACAAAAATATGAAGTTCTATCTAGTAAGTGTTTTGATCATATTGCCTTGCCTTTTAAAAGCAACATCAGCTGAGCAATGTGGGAGGCAAGCTGGTGGCGCACTTTGTCCTAATGGCCTTTGTTGTAGCCAGTACGGATGGTGCGGGACTACCATCGAATATTGTGGGACCGGGTGCCAGAGTGGATGCCCTGGTGGGGGAGATGTGGGGTCCATCATCACTCGTTCCCTCTTTGATCAAATGCTCAAACATCGTAATGAGAATAGTTGTGAGGGTCATGGGTTTTATACCTATGATGCTTTCATTGCAGCGGCTCGTTCTTTCAATGGGTTTGGCACCACTGGGGATCTTACTACTCGTAAGCGAGAGCTTGCCGCTTTCTTTGCTCAAACCTCTCATGAAACCACCGGAGGTTGGCCAAGTGCACCAGATGGTCCTTATGCATGGGGATATTGTTTCCTTAGAGAACAAAACAACCCACCTGCTTATTGTGATTCTCCTAGTTGGCCTTGCCCTGCTGGTCGAAAGTACTATGGCCGAGGACCTATCCAGTTGACCCACAACTACAACTACGGGCTGGCAGGTAAAGCCCTGGGAGTGGACCTGATAAACAACCCAGATTTGGTAGCCACAGACCCAACCATATCCTTCAAGACAGCCATTTGGTTTTGGATGACTGCACAAGGGAATAAGCCCTCTTGCCACAACGTCATCATAGGACAGTGGACCCCATCGGCGGCGGACAGGTCAGCAGGGCGGGTCCCAGGATACGGTGTGATCACCAATATTATAAACGGGGGAATTGAGTGTGGCAAAGGACAAAACGCCCAGGTGGCTGATCGTATTGGGTTCTATAAGAGATACTGTGACCTCTTGGGTGTGAGCTATGGTGACAACTTGGACTGTTACTCCCAGCAACCATTTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_434187.p1 GENE.R_Transcript_434187~~R_Transcript_434187.p1 ORF type:5prime_partial len:317 (+),score=29.69,Glyco_hydro_19|PF00182.15|5.6e+03,Glyco_hydro_19|PF00182.15|5.8e-131,Chitin_bind_1|PF00187.15|3.5e-15,Chitin_bind_1|PF00187.15|3.5e+03,Chitin_bind_1|PF00187.15|1.6e+04,Chitin_bind_1|PF00187.15|9e+03 R_Transcript_434187:1-951(+)
GKITTLTYKNMKFYLVSVLIILPCLLKATSAEQCGRQAGGALCPNGLCCSQYGWCGTTIEYCGTGCQSGCPGGGDVGSIITRSLFDQMLKHRNENSCEGHGFYTYDAFIAAARSFNGFGTTGDLTTRKRELAAFFAQTSHETTGGWPSAPDGPYAWGYCFLREQNNPPAYCDSPSWPCPAGRKYYGRGPIQLTHNYNYGLAGKALGVDLINNPDLVATDPTISFKTAIWFWMTAQGNKPSCHNVIIGQWTPSAADRSAGRVPGYGVITNIINGGIECGKGQNAQVADRIGFYKRYCDLLGVSYGDNLDCYSQQPFA*

Click here to download the sequence:
Link to NCBI Protein BLAST