Transcript Information: R_Transcript_43422.p1


Annotated TAIR IDAT2G47410.1
Annotated Gene NameWD40/YVTN repeat-like-containing domain;Bromodomain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19449133-19456991 | Forward length=1520
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8089422621049
Replicate 26.9721555248037
Replicate 38.1871989887389
Condition 2: 8 Hour
Replicate 17.649893167929
Replicate 28.544747623723
Replicate 39.5129163390748
Condition 3: 24 Hour
Replicate 19.674868064907
Replicate 27.6312872967397
Replicate 38.7939193735697


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43422.p1 GENE.R_Transcript_43422~~R_Transcript_43422.p1 ORF type:complete len:1578 (+),score=360.01,WD40|PF00400.28|5.5e-06,WD40|PF00400.28|0.00011,WD40|PF00400.28|5.2e-05,WD40|PF00400.28|0.2,WD40|PF00400.28|14,WD40|PF00400.28|1.5e+02,WD40|PF00400.28|0.18,Bromodomain|PF00439.21|2e-05 R_Transcript_43422:360-5093(+)
ATGGCTAAGAAAACTGATGATGATTATGCTCGTGCTCAGGTTGGTCACATGGTAATGGATTTTCACAATTGTGCATCTTCTAATTATGTGTCACTTCAGAATAAGAGAACAAGCATTCCATATAAGGGCCCTGAGAATCCTCTTTCTGAAGGGCGAGAACGAGTTAGCGACCATGCCATTGTAGCTGATGTTGATATTGATCTTCGAGAAGTTTATTTTTTGATCATGCATTTTTTGTCTGTTGGACCATGCCAGAAAACTTTTGCACAGTTCTTGAATGAACTCGGCGAACATCAGCTCTTGCCTAGAAGATATCATGCCTGGTATTCAAGAACTGGGTTGCATAGTGGTCATGAGACCGATGATGGTATATCATTCCCTTTGACCTATGAAAAATTGCTGCATAGGTATCCCCACATTGCTAAAGATCATTTGGTCAGACTCTTGAAGCAGCTCCTGCTGAGTTCTTCCTATCCATCTCTTGGAATGGGCAACAGCCCCAATGCAGCTGATGTTCCTACTTTGTTGGGGACTGGTTCCTTTTCACTACTGAGTTGTGATAGAAATGAGGACAAGAAACAAGTCAAGCTACCCCCTGCTTACCTGCGTTGGCCTCACAAGCAGGTTGATCAAGTGCGTGGATTGCATCTAAGGGCTATTGGTGGGGGTTTTACAAGACACCATCGTGCTTCCTCGATCCATGCTGCCTGTTACGCGATTGCAAAGCCATCGACCATGGTACAAAAGATGCAAAATATAAAGAGGCTCAGGGGTCACCGGAATGCTGTTTATTGTGCCATATTTGATCGCTCAGGAAGGTATGTCATTACTGGATCTGATGACCGTCTTGTAAAAATTTGGTCAATGGAAACCGCATTTTGCTTGGCCAGCTGCCGTGGACATGAAGGAGATATTACTGACTTGGCTGTAAGCTCGAACAATGCTTTGGTGGCATCTGCTTCAAATGACTTTGTCATTCGAGTTTGGCGTTTGCCAGATGGGCTTCCAATATCAATATTGCAGGGGCATACGGGGGCTGTTACTGCAATTGCCTTTAGTCCCAGGGCTGGATCTGCATATCAGCTTTTGTCATCTTCAGATGATGGGACCTGTCGGATTTGGGATGCAAGGAGCTCAGTCTGCAAGCCTCGAATTTATTTGCCAAGGCCTGATGATGCTGGGACTGGTACTGGTCAACAGAATCATCAAATTTTATGCTGCGCATACAATGCAAATGGAACTGTCTTTGTGACCGGTAGCTCTGATACTCATGCAAGGGTTTGGAGTGCCTGCAAGTTCAATGCTGATGATCCAGAGCAACCACAGCATGAGATTGATCAGTTGGAAGGGCATGAGAACGACGTCAACTATGTGCAATTTAGTGGGTGTGCTGTCATTGCAAGATCAACTTATAATGACAGTCTAAAGGAAGATAATGCACTGAAGTTTAAAAATTCATGGTTCAGTCATGATAATATAGTGACTTGTTCTCGTGATGGTAGTGCTATTATTTGGACTCCAAGATCACGCAGATCACATGGAAAAGTCGGGCGCTGGACTAAGGCTTACCATCTAAAAGTGCCCGCTCCTCCTTTGCCCCCTCAACCGCCACGTGGGGGACCACGTCGAAGACTTCTTCCTACTCCTCGTGGAGTAAATATGATTGTGTGGAGTCTTGATAACCGTTTTGTGCTTGCTGCTATAATGGATTGCAGAATATGTGTTTGGAATGCAGGAGATGGAAGTTTAGTTCATTCTTTAACTGGTCATACGGAATCTACGTATGTTTTAGATGTGCATCCATTCAATCCTCGTATAGCTATGAGTGCTGGTTATGATGGAAGAACCATTATATGGGATATTTGGCAGGGAACCCCAGTTCGAGTTTTTGAAATTGGACGTGGGAAATTGGTTGACGGAAAATTCTCTTCGGATGGTACATCAATTGTACTTTCAGATGATGTTGGCCAGATATACCTGCTAAACACTGGGCAAGGTGAATCACATAAAGATGCCAAATATGACCAGTTTTTCCTAGGCGATTATCGCCCTCTTATCCGTGATGCTGTTGGAAATGTTCTTGACCAGGAGTCTCAGCTTACTCCTTATCGAAGAAATCTTGTGGACCCTCTTTGTGATTCAAGCATGATGCCATATCCTGAACCTTACCAAAGCATGTACCAGCGCCGGCGTCTTGGAGTACTGGGCGTTGAATGGCGTCCATCTCCTGTAAACTTTGCTGTTGGACCAGACTTCAGCTTGGGTGAAGATTATCAAATGATGCCTTTGCCAGATCCAGAAGCAATTATTGATGTGCCTGAACCTTTGGACGCCACTTTCTGGGAGCCAGAGATTGAAGTCATAAGTGATGATGCAGACTCAGAGTACGATGTAGCGGAGGAATATTCAAGTGCAAAAGAGCCAGAAAGTTTAAGTACCAGCTCCTATGATGATACAGATTCTGATACTGAGAATTTTGAACACAAGCAAAGGCATAAAGATGTCCTCCGTCGATCCAAAAGGAAGAATGAGAGAACTCAGGTTGAGTTTACCCCTTCCGGGAGACGCATTAGGAGGAGGAGGGTGGAAGATTGTAACAATGCTTCTTACCAGAGCAATAGTGGTGGCGTGAAATCAAGAAGAACTCGGAAGGTTTCAAAAAAGAAATGGTCCGAAACCAAATTATCCAGACCTCAGAGAGTTGCTGCCAAAAATGCTCTTAGTGTGTTTTCGAGAGTAGAGACATCTTCGCCTGGGGAAGACGAGGATGACTTAGAAACTGATTCCTCTGACAGTGATTCATTTCCTCAAGATTCAACCCCTAAGGTTGATGAGGCTGATTGGAGGTCAGGCCAAGATTGTGAAAAAGCTCTGTTTGACGAATCTGCTACTGCAATGGACCCAGTTGAGCTGTCTAAAGCTCAGGAATGTGGTGGAAGCAGAAGAAAATTGGTGCTTAAACTGTCTATTCGTGATTCTACGAAGTCTTTGGTCTTGGAACCATCAAGAGATGAAAGTGATGGTAAAAACAATTTGGAGGCTTCATCTTCTTTACCTTGTGCAGAGGTACACAAGCAGAGAAGCTTAAGTAGTGATAAAGATATGCAACAGCCTCCTGATGCAACTGATCAAAAACTATCTCGCAATTTAAACAAAGTAAGAATCAGGTGTAAAGGACTGCTTCCTGATCATGTATTTTCTTCTAATGTTGTTGATGATGTCAAAACTCCCAATAAGCTGAGTGCAACTGATGATACAATAATGGAAGCTTCTTGTAGTCGACGTATCCCAACAGGAGCAGAAGAAGATGGTGATTATGGTTCTATTGAACATTATGCTGTCGATAATGTTTACTTTCATGATGTCAAAGACAATGCTCAACCTGTACCAACCAGGATTAGAATTAAATCAAGTGGAATTTCAAAGCCAGAGAAAACTGCCAAATTGAAATTGGTCTCTGGGGTAAAAAATCTAGCTGCTGCTGGAGATTCTTTGGTGCCAAGAAGTGGAAGCGAAGAGAATATATCCAATACAAGCTGCCACTATCACTGTCCAGATGCTGATCTTCCTGATGCTGAGACTGATGTGGCACGTCGAATGAGGTCAATGGACATGGAGGCAAGCACACGTGACCCAGACAGGGGAAAGCATAAGTTGAAGTTGAGGAAGGGTGACAGATCCGCGGGGATGTCAAAAGTTTCTGAGGCTTCATCCGCACCATGGATGTTAAACTCAAACATTTCTGTCAGGTCCAGGTCAATTAACAGCAGGCAAGAGAGCTTTTACAGGGATGAATCTGGTCTTCCAGATACAACTGAGTCAAATCTTTCTGGTAGGAAAATATCATGGCTGATGTTGTCTGAGCATGAGCCAGGTTACCGTTATATTCCCCAGCTTGGAGATCAAGTAGCGTATCTGATCCAGGGCCATCGAGAATATGTAGAAACAGTTGAATCACATGAAAGGGGACCGTGGATAACATTCAAGGGACGGTTGAATGCTGTTGAGATTTGTGTAGTGGAAGGCCTTCATTATGCCGAAGCCCCTGGTTCTGGGGAGAGCTGCTGTAAGCTCGCCCTTAGGTTCATAGATACTTTGTCTGATGTGTGTGGGAAATCATTTAGGTTGACACTTCCAGAACTAAATTTCCCTGATTTTTTGGTTGAGAAAACATGGTATGATTCTTCTGTAAGTAGAAATTGGAAACCTGGGGAGATATGCTCAGTATGGTGGAGGGATGAGAATGGTGAAGGTGGTAAATGGTGGGATGGTCGGATTATATCATTAAAAGCAAAGTCCAGTGATTTTCCTGACAGTCCATGGGAAAGATATGGCGTTCAATACAATAATGATCCTGAGACGCAGCTACATAGTCCTTGGGAATTGCATGAACCTGAAGTTCGGTGGGAGCCTCCCCATATTGATTTTGATACGAGAAACAAATTGCTTGATTGTATCTCTAAATTAGAAAGGAGAAAACAGGATGGAATGCTGAAATTGGAACAAGTAGCTCAGAAGCCAGACTTCCTAAACAAGTTTCCTGTACCATTGTCTCCAGACATTGTCAAATCAAGGTTAAAGCATAACTATTATCGGAGCTTGAAAGCAGTAAAACACGACATGGATGTGATGATGTCAAATGCCATGTCTTATTTTTCGAAAAAGGCAGAAGTTTCAAGACAGATGAAACACTTAGCCGAAAATTTTGAAAGGACACTTTCATCTTTGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43422.p1 GENE.R_Transcript_43422~~R_Transcript_43422.p1 ORF type:complete len:1578 (+),score=360.01,WD40|PF00400.28|5.5e-06,WD40|PF00400.28|0.00011,WD40|PF00400.28|5.2e-05,WD40|PF00400.28|0.2,WD40|PF00400.28|14,WD40|PF00400.28|1.5e+02,WD40|PF00400.28|0.18,Bromodomain|PF00439.21|2e-05 R_Transcript_43422:360-5093(+)
MAKKTDDDYARAQVGHMVMDFHNCASSNYVSLQNKRTSIPYKGPENPLSEGRERVSDHAIVADVDIDLREVYFLIMHFLSVGPCQKTFAQFLNELGEHQLLPRRYHAWYSRTGLHSGHETDDGISFPLTYEKLLHRYPHIAKDHLVRLLKQLLLSSSYPSLGMGNSPNAADVPTLLGTGSFSLLSCDRNEDKKQVKLPPAYLRWPHKQVDQVRGLHLRAIGGGFTRHHRASSIHAACYAIAKPSTMVQKMQNIKRLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGLPISILQGHTGAVTAIAFSPRAGSAYQLLSSSDDGTCRIWDARSSVCKPRIYLPRPDDAGTGTGQQNHQILCCAYNANGTVFVTGSSDTHARVWSACKFNADDPEQPQHEIDQLEGHENDVNYVQFSGCAVIARSTYNDSLKEDNALKFKNSWFSHDNIVTCSRDGSAIIWTPRSRRSHGKVGRWTKAYHLKVPAPPLPPQPPRGGPRRRLLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAGDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIIWDIWQGTPVRVFEIGRGKLVDGKFSSDGTSIVLSDDVGQIYLLNTGQGESHKDAKYDQFFLGDYRPLIRDAVGNVLDQESQLTPYRRNLVDPLCDSSMMPYPEPYQSMYQRRRLGVLGVEWRPSPVNFAVGPDFSLGEDYQMMPLPDPEAIIDVPEPLDATFWEPEIEVISDDADSEYDVAEEYSSAKEPESLSTSSYDDTDSDTENFEHKQRHKDVLRRSKRKNERTQVEFTPSGRRIRRRRVEDCNNASYQSNSGGVKSRRTRKVSKKKWSETKLSRPQRVAAKNALSVFSRVETSSPGEDEDDLETDSSDSDSFPQDSTPKVDEADWRSGQDCEKALFDESATAMDPVELSKAQECGGSRRKLVLKLSIRDSTKSLVLEPSRDESDGKNNLEASSSLPCAEVHKQRSLSSDKDMQQPPDATDQKLSRNLNKVRIRCKGLLPDHVFSSNVVDDVKTPNKLSATDDTIMEASCSRRIPTGAEEDGDYGSIEHYAVDNVYFHDVKDNAQPVPTRIRIKSSGISKPEKTAKLKLVSGVKNLAAAGDSLVPRSGSEENISNTSCHYHCPDADLPDAETDVARRMRSMDMEASTRDPDRGKHKLKLRKGDRSAGMSKVSEASSAPWMLNSNISVRSRSINSRQESFYRDESGLPDTTESNLSGRKISWLMLSEHEPGYRYIPQLGDQVAYLIQGHREYVETVESHERGPWITFKGRLNAVEICVVEGLHYAEAPGSGESCCKLALRFIDTLSDVCGKSFRLTLPELNFPDFLVEKTWYDSSVSRNWKPGEICSVWWRDENGEGGKWWDGRIISLKAKSSDFPDSPWERYGVQYNNDPETQLHSPWELHEPEVRWEPPHIDFDTRNKLLDCISKLERRKQDGMLKLEQVAQKPDFLNKFPVPLSPDIVKSRLKHNYYRSLKAVKHDMDVMMSNAMSYFSKKAEVSRQMKHLAENFERTLSSLL*

Click here to download the sequence:
Link to NCBI Protein BLAST