Transcript Information: R_Transcript_43444.p1


Annotated TAIR IDAT1G73590.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN1, ATPIN1
Annotation TypeOrtholog
Chromosome Positionchr1:27659772-27662876 | Forward length=622
E-Value1.2e-321
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.961579565913
Replicate 236.318843276736
Replicate 342.699938043313
Condition 2: 8 Hour
Replicate 141.483334303828
Replicate 240.741671445267
Replicate 351.693907268416
Condition 3: 24 Hour
Replicate 153.568216864643
Replicate 247.857770505282
Replicate 349.08795905508


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43444.p1 GENE.R_Transcript_43444~~R_Transcript_43444.p1 ORF type:complete len:618 (+),score=104.92,Mem_trans|PF03547.14|1.3e-199 R_Transcript_43444:634-2487(+)
ATGATTACGTTAGCGGATTTCTACCATGTGATGACGGCGGTGGTGCCGCTCTACGTGGCGATGATCCTCGCCTACGGCTCCGTGAAATGGTGGAAGATCTTCAGCCCTGACCAATGTTCAGGCATCAACCGTTTCGTGGCTCTTTTTGCTGTCCCACTTTTGTCCTTCCATTTTATCTCCTCAAACAACCCGTATACAATGAACCTGAGGTTCATTGCGGCTGACACGCTCCAGAAGGTGATTGTTCTCGTAGCGCTCGCCATTTGGAGTAAGGTCAGCAAGCGGGGTTGTCTGGAGTGGACTATCACTCTTTTCTCATTATCGACGCTCCCCAACACGCTTGTGATGGGCATTCCCTTGTTGAAGGGAATGTACGGGGATTTTTCCGGGAGTTTGATGGTTCAGATTGTGGTGCTACAGTGTATCATTTGGTACACACTCATGTTGTTTATGTTTGAGTACAGAGCAGCTAAGATGCTGATTTCTGAGCAGTTTCCTGACACTGCAGGCTCTATTGTGTCTATTCATGTTGACTCTGATGTTGTGTCGCTTGATGGAAGACAGCCTCTTGAGACTGAGGCTGAGATCAAGGACGATGGCAAGTTACATGTCACGGTCCGGAGGTCCAATGCCTCTCGGTCTGACATCTTCTCTAGGAGGTCGCAGGGGTTTTCTTCCACCACCCCGCGACCTTCTAACTTGACGAATGCCGAGATTTACTCTCTGCAATCGTCAAGGAACCCTACCCCTCGAGGCTCCAGCTTCAACCATACAGATTTTTACTCCATGGTTGGAGCTGGAGGGGCCGGGGGTGGTGGTGGAAGGAACTCCAATTTTGGGGCCAACGACCTGTACAATCTTGGCCTCACCACCTCCCGAGGGCCGACTCCCCGACCCTCCAACTTCGAGGAGGACACCAGCAATAGCAGGCCTAAGTATCCTGCTTTTGGTGGTGGTGGTGGTGCTGGAGCTGGAACTCATTACCCGGCCCCGAACCCGGGGATGTTCTCTCCTACTAAGAAGGATGGGACTAACAATAACAATGTGAAGAAGGCTGTGAATGGACAAAAGGGAGGAGAAGAAGGGAACAAGGATCTTCACATGTTTGTATGGAGTTCAAGTGCTTCTCCTGTTTCAGATGTGTTTGGTGGCCATGACTATAATGTTGCTACTGATCAGCCAGTGAAGGATGTTAGGATGAATGTCTCTCCTGGCAAAGTGGAAACAGGAAGAGAAAACCAGGAAGAGTACTTAGAGAGAGATGATTTCAGTTTTGGAAACAGAGGAATAGAAGGAGAAATGAAAGAGAATCAAGGAACAAAATTGGATGATGGAAAATCAAAGCCATTGCCACCAGCAAGTGTCATGACCAGACTTATACTCATTATGGTTTGGAGGAAACTCATCAGAAATCCCAACACTTATTCCAGCTTGATTGGTCTCACTTGGTCTTTGGTCTCCTTCAGGTGGCATTTGAAGATGCCGGCCATCATCGCAGAGTCCATTTCCATATTGTCGGATGCAGGTCTTGGCATGGCCATGTTCAGTCTCGGGCTGTTCATGGCTTTGCAACCGAGGATAATAGCATGTGGAAATTCGATAGCAACATTTGCAATGGCAGTAAGATTCCTCACAGGTCCAGCTGTCATGGCTGCTGCTTCTATTGTTGTTGGTCTCCGTGGTATTCTTTTACACGTTGCCATCGTCCAGGCAGCACTCCCACAAGGAATTGTCCCCTTTGTATTTGCCAAGGAGTATAACGTGCACCCTGACATTCTTAGCACAGCTGTTATTTTTGGGATGCTAATTGCGTTGCCAATAACGTTGGTCTACTACATTTTGCTGGGACTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43444.p1 GENE.R_Transcript_43444~~R_Transcript_43444.p1 ORF type:complete len:618 (+),score=104.92,Mem_trans|PF03547.14|1.3e-199 R_Transcript_43444:634-2487(+)
MITLADFYHVMTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISSNNPYTMNLRFIAADTLQKVIVLVALAIWSKVSKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEYRAAKMLISEQFPDTAGSIVSIHVDSDVVSLDGRQPLETEAEIKDDGKLHVTVRRSNASRSDIFSRRSQGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVGAGGAGGGGGRNSNFGANDLYNLGLTTSRGPTPRPSNFEEDTSNSRPKYPAFGGGGGAGAGTHYPAPNPGMFSPTKKDGTNNNNVKKAVNGQKGGEEGNKDLHMFVWSSSASPVSDVFGGHDYNVATDQPVKDVRMNVSPGKVETGRENQEEYLERDDFSFGNRGIEGEMKENQGTKLDDGKSKPLPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWHLKMPAIIAESISILSDAGLGMAMFSLGLFMALQPRIIACGNSIATFAMAVRFLTGPAVMAAASIVVGLRGILLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILLGL*

Click here to download the sequence:
Link to NCBI Protein BLAST