Transcript Information: R_Transcript_43471.p1


Annotated TAIR IDAT5G59180.1
Annotated Gene NameDNA-directed RNA polymerase II
Annotated Gene Symbol(s)NRPB7
Annotation TypeOrtholog
Chromosome Positionchr5:23883499-23884976 | Forward length=176
E-Value5.8E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.54711945858
Replicate 26.2332766860885
Replicate 38.947944373497
Condition 2: 8 Hour
Replicate 110.329974274619
Replicate 212.752690425051
Replicate 313.61370796529
Condition 3: 24 Hour
Replicate 113.451840172483
Replicate 29.9937891847928
Replicate 311.627843114914


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43471.p1 GENE.R_Transcript_43471~~R_Transcript_43471.p1 ORF type:5prime_partial len:128 (+),score=31.69,SHS2_Rpb7-N|PF03876.13|3.5e-16,S1|PF00575.19|1.4e+04,S1|PF00575.19|1.3e-07 R_Transcript_43471:3-386(+)
ACGTTCATTGATTTGCCCCTGCTTGTGAAGATGTTTTTCCACATAATCCTTGAGAGGAACATGCAGCTTCACCCTCGCCATTTTGGAGCTCGACTTCGAGACAAACTCGTCTCCAAACTCATGAAAGATGTCGAGGGTACTTGCAGTGGGCGTCATGGATTTGTGGTTGCAATTATGGGAATAGAGAATGTGGGCAAAGGGTTGATCAGGGATGGAACTGGGTTTGTCACTTTCCCTGTCAAATACAAGTGTGTTGTCTTTAGGCCTGTCGAGGGTGAGATTCTTGAAGCTGTTGTTACTATGGTCAACAAGATGGGTTTCTTTGCTGAGGCTGGTCCTGTGCAAATTTTTGTGTCTAATCATCTGATACCAGATGACATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43471.p1 GENE.R_Transcript_43471~~R_Transcript_43471.p1 ORF type:5prime_partial len:128 (+),score=31.69,SHS2_Rpb7-N|PF03876.13|3.5e-16,S1|PF00575.19|1.4e+04,S1|PF00575.19|1.3e-07 R_Transcript_43471:3-386(+)
TFIDLPLLVKMFFHIILERNMQLHPRHFGARLRDKLVSKLMKDVEGTCSGRHGFVVAIMGIENVGKGLIRDGTGFVTFPVKYKCVVFRPVEGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM*

Click here to download the sequence:
Link to NCBI Protein BLAST