Transcript Information: R_Transcript_434825.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48034107775576
Replicate 20.13813355537038
Replicate 30.30140444205464
Condition 2: 8 Hour
Replicate 10
Replicate 20.29422212948928
Replicate 30.1194184909236
Condition 3: 24 Hour
Replicate 10.60415282178169
Replicate 20.14510038743801
Replicate 30.14399805715064


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_434825.p1 GENE.R_Transcript_434825~~R_Transcript_434825.p1 ORF type:5prime_partial len:152 (+),score=20.05,zf-RVT|PF13966.2|4.3e+03,zf-RVT|PF13966.2|3.2e-17 R_Transcript_434825:3-458(+)
CTGTGGAAGGATTGGTGCTGCAAATATTATCTGAAGGGGACATCAGTGTGGGATATCCAGCCTAGACAGGTGGATTCTTGGGCTTGGAAGAGAATGTTGAGCATAAGGGATGAATTCATAACTCTAGTAGAGAGAGGCCAAGCAACAGATACTATACAAAGGTGGTCAGAAATAGGAGATATTACAGCTGAAGCATACAGATTATTTAGAGGAGAGGGAAGTAATAAGTATTGGGCAAAAATAGTGTGGGATAATGCAAACATGCCAAAGCATGCATTCACATCTGTTATGGCCATTTCTAATGGATTGCCTACTCAGGATAACCTTGCAAGAAGAGGTATTCCCATAGTAAACAGATGTGTTCTTTGCTGTAGTAGTCTGGAGTCCATTAGGCACCTATACTTCGAGTGGCCTTTTGCTAAGGAGACATGTTCTGATCTGGTTATGAATCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_434825.p1 GENE.R_Transcript_434825~~R_Transcript_434825.p1 ORF type:5prime_partial len:152 (+),score=20.05,zf-RVT|PF13966.2|4.3e+03,zf-RVT|PF13966.2|3.2e-17 R_Transcript_434825:3-458(+)
LWKDWCCKYYLKGTSVWDIQPRQVDSWAWKRMLSIRDEFITLVERGQATDTIQRWSEIGDITAEAYRLFRGEGSNKYWAKIVWDNANMPKHAFTSVMAISNGLPTQDNLARRGIPIVNRCVLCCSSLESIRHLYFEWPFAKETCSDLVMNL*

Click here to download the sequence:
Link to NCBI Protein BLAST