Transcript Information: R_Transcript_434863.p1


Annotated TAIR IDAT1G20960.1
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase, putative
Annotated Gene Symbol(s)emb1507
Annotation TypeHomolog
Chromosome Positionchr1:7302591-7309914 | Reverse length=2171
E-Value8E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10197184890904
Replicate 20
Replicate 30.25594120219165
Condition 2: 8 Hour
Replicate 10.27358508320944
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.12825590630002
Replicate 20.24642747363774
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_434863.p1 GENE.R_Transcript_434863~~R_Transcript_434863.p1 ORF type:5prime_partial len:179 (+),score=20.08,Sec63|PF02889.12|1.1e-30 R_Transcript_434863:1-537(+)
AAACGAATTGAAGATATTTTGGATCTTTCCGATGATGACAGAAACAATCTACTGATGATGAACGATCACCAGTTAGCTGACGTGGCAAAAGTATGTAACAAATACCCCGATGTGGAAGTAGATTATCAGATCGCCGATTCAGATCAGCTGTTTTGTGATGACTCAGTTTCTGTTGTGGTTCAGTTAAAGAAAGAAAATGATGAAGACGAGGATGAGGAAGAAGATGAGGAGAACTTGTTCGTTAACGCTCCTTTCTATCCAAAAGCGATCTTGGAAGGTTGGTGGGTCATCATCGGTGATTTGGAAAATAACACGATGCTGGCAATGAAACGAGTTTCATTTCAACGAAACTCAACCGCTCAAACTCAGCTTACCTTCACCGCTCCAAAACAACCCGGCAGTTATCACTATCGCCTTTATGTTCTTTGCGACTCCTATCTTGGTTGCGATCAAGAATATTCACTCGATTTCAATTTCCTCCCAAACTCCGGCGATGACCAAAAAATGGAAGACAAAGACGTCGAAATGGCCGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_434863.p1 GENE.R_Transcript_434863~~R_Transcript_434863.p1 ORF type:5prime_partial len:179 (+),score=20.08,Sec63|PF02889.12|1.1e-30 R_Transcript_434863:1-537(+)
KRIEDILDLSDDDRNNLLMMNDHQLADVAKVCNKYPDVEVDYQIADSDQLFCDDSVSVVVQLKKENDEDEDEEEDEENLFVNAPFYPKAILEGWWVIIGDLENNTMLAMKRVSFQRNSTAQTQLTFTAPKQPGSYHYRLYVLCDSYLGCDQEYSLDFNFLPNSGDDQKMEDKDVEMAD*

Click here to download the sequence:
Link to NCBI Protein BLAST