Transcript Information: R_Transcript_43529.p1


Annotated TAIR IDAT1G17980.1
Annotated Gene Namepoly(A) polymerase 1
Annotated Gene Symbol(s)PAPS1
Annotation TypeOrtholog
Chromosome Positionchr1:6187742-6191418 | Reverse length=713
E-Value6.2E-233
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7432195654491
Replicate 21.5777566786814
Replicate 33.4867673797612
Condition 2: 8 Hour
Replicate 12.0286940129702
Replicate 22.1111429869327
Replicate 33.3575233517479
Condition 3: 24 Hour
Replicate 12.9637246324782
Replicate 21.6998272748036
Replicate 32.0664692286281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43529.p1 GENE.R_Transcript_43529~~R_Transcript_43529.p1 ORF type:complete len:519 (+),score=87.24,PAP_central|PF04928.13|2.9e-105,PAP_RNA-bind|PF04926.11|1.1e-09,PAP_RNA-bind|PF04926.11|1.4e+02,NTP_transf_2|PF01909.19|9.5e-10 R_Transcript_43529:591-2147(+)
ATGTTTAAGTTTAACAACGGTTGCAGAAACCCTAGAATGGCTGTTCGTGGTGTGCCAGATAATAAAGTGAATGCACCAGGGCGTCTTGGGATATCAGATCCTATTTCAGTAGCTGAGCCTTCTGAGTCTGACATTATCAAAAGCAAAGAATTAGAAAAGTTCATTGTAGATTCTGGGCTATTTGAATCAAAGGAAGAGGCTATTAAGAGGGAAGAAGTGTTGGGCAGATTGGATGAGGTGGTGAAGTTGTGGGTGAAGAATGTGACTAGGGCAAAGGGGTTCAATGATCAAGTGGTGGAAGAATCAAATGCAAAGATTTTCACCTCGGGCTCATATCGCTTAGGGGTGCATGGCCCAGGTGCTGATATAGACACACTGTGTGTTGGACCTAGATATGCTACAAGAGAGGACTTCTTTGGCGAGCTCCATAACTTGCTTGCGGAGATGCCTGAAGTACAGGAGCTCAACCCTGTACCTGATGCTTATGTTCCTGTGCTGAAATTTAAGTTTGATGGAGTTTCAATTGACCTTCTTTATGCAAGCTTGGACCTATGGATTATTCCAGAAGATCTCAATCTCTTACAAGACTCCGTTTTACGAAATGTGGATGAGCAGACAGCTCGCAGTCTCAATGGGTGCAGAGTTACTGACCAGATTTTGCATTTAGTTCCAAATATTCAGAATTTCCTCTCCTCTCTGAGATGCATCAGATTTTGGGCAAAGCAACGTGGTATTTACTCAAATGTCTCAGGTTTCTTGGGTGGCATCAATTGGGCAATTCTTGTTGGATGGATTTGTCAGCTGTACCCCAACGCTTTGCCAGCAATGTTGGTCTCTCGTTTTTTTAGGATATACAGCCAGTGGAAGTGGCCTCGTCCCATTATGCTTTGTGAAATAAAAGAAGGATCTTTAGGTCTACCAGTTTGGAATCCAAAATGGAATCTTAAAGATAGGCAGCATTTGATGCCAATAATAACCCCAGCATATCCTTCAATGAACTCTAGCTATAATGTGTCATCAAGTACATTGCGTATCATGCAACAAGAGTTTCAGAGGGGGCTCAAAATCTGTGAGGAGTTGGAAACATCACATAAATCTGACTGGAATGCGCTGTTTGAGCCTTTTGCTTTCTTTGAAGCATACAAGGATTATCTCAAGATTGATATTGGCGCTGGCAATGAGGTTGACTTCAGGCAATGGAAAGGGTGGGTTCAATCCCGAATTCGTCTGTTGACCTTGAAGATTGAGAGGGACACAAGATCTATGCTGCAGTGCCATCCTTATCCTACTGAATTCCCAGGCAATTCCAAGAAATTTCAATGTTGTTTCTTCATGGGTCTAAAAAAACAAGAAGGTTTTCAAGCCAAGGATACTGGTTCCTTTGATTTAAGGTGTACCATTCAGCAATTCAAGTACGAAGTTGGAAGTTCATGTTTGCAGACATGGAATGTTAGTTCATGTTTCTTATGTCAGAAGCAGGGACCTTCCTGCATTTGTTTTTCCTGGAGAAATCATGCCTTCTCGTCCTGTGCAAGCAGCTTCAAAACGCAAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43529.p1 GENE.R_Transcript_43529~~R_Transcript_43529.p1 ORF type:complete len:519 (+),score=87.24,PAP_central|PF04928.13|2.9e-105,PAP_RNA-bind|PF04926.11|1.1e-09,PAP_RNA-bind|PF04926.11|1.4e+02,NTP_transf_2|PF01909.19|9.5e-10 R_Transcript_43529:591-2147(+)
MFKFNNGCRNPRMAVRGVPDNKVNAPGRLGISDPISVAEPSESDIIKSKELEKFIVDSGLFESKEEAIKREEVLGRLDEVVKLWVKNVTRAKGFNDQVVEESNAKIFTSGSYRLGVHGPGADIDTLCVGPRYATREDFFGELHNLLAEMPEVQELNPVPDAYVPVLKFKFDGVSIDLLYASLDLWIIPEDLNLLQDSVLRNVDEQTARSLNGCRVTDQILHLVPNIQNFLSSLRCIRFWAKQRGIYSNVSGFLGGINWAILVGWICQLYPNALPAMLVSRFFRIYSQWKWPRPIMLCEIKEGSLGLPVWNPKWNLKDRQHLMPIITPAYPSMNSSYNVSSSTLRIMQQEFQRGLKICEELETSHKSDWNALFEPFAFFEAYKDYLKIDIGAGNEVDFRQWKGWVQSRIRLLTLKIERDTRSMLQCHPYPTEFPGNSKKFQCCFFMGLKKQEGFQAKDTGSFDLRCTIQQFKYEVGSSCLQTWNVSSCFLCQKQGPSCICFSWRNHAFSSCASSFKTQS*

Click here to download the sequence:
Link to NCBI Protein BLAST