Transcript Information: R_Transcript_435574.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value2.5E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4845918837536
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.65006721098881
Replicate 20.59365173029696
Replicate 30.64253488921724
Condition 3: 24 Hour
Replicate 10.8126657425736
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_435574.p1 GENE.R_Transcript_435574~~R_Transcript_435574.p1 ORF type:internal len:113 (-),score=13.88,Ion_trans|PF00520.27|2.8e-10 R_Transcript_435574:3-338(-)
GTTTTATCATGCGTTATTGCAGTGTCAATAGATCCTTTGTTCTTTTACATCCCTGTAATTAACAATGATAAGAAGTGCCTTGATTTGGACAATAAGTTGGAGATCACTGCTAGTGTTTTGCGCTCTTTCACTGATATCTTTTATGTCCTTCATATCATCTTCCAGTTTCGTACTGGTTTTATTGCTCCCTCTTCCCGGGTCTTTGGCAGAGGTGTTCTGGTCGAAGATGCAAAAGAAATTGCAAAAAGATATTTGTCCTCTTACTTCTGGATTGACATTCTTGCTGTACTTCCTTTACCACAGGTATATAGTTTCAACAAGCTTACAACTGGATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_435574.p1 GENE.R_Transcript_435574~~R_Transcript_435574.p1 ORF type:internal len:113 (-),score=13.88,Ion_trans|PF00520.27|2.8e-10 R_Transcript_435574:3-338(-)
VLSCVIAVSIDPLFFYIPVINNDKKCLDLDNKLEITASVLRSFTDIFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDAKEIAKRYLSSYFWIDILAVLPLPQVYSFNKLTTGL

Click here to download the sequence:
Link to NCBI Protein BLAST