Transcript Information: R_Transcript_435715.p1


Annotated TAIR IDAT4G20160.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G30860.1); Has 64917 Blast hits to 39974 proteins in 1949 species: Archae - 279; Bacteria - 7425; Metazoa - 26604; Fungi - 5788; Plants - 3193; Viruses - 275; Other Eukaryotes - 21353 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10890983-10894971 | Forward length=1188
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28972953896379
Replicate 20.22218307318834
Replicate 30.12119966982091
Condition 2: 8 Hour
Replicate 10
Replicate 20.11831154413326
Replicate 30
Condition 3: 24 Hour
Replicate 10.60734939755831
Replicate 20.70016694890722
Replicate 30.11580796130633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_435715.p1 GENE.R_Transcript_435715~~R_Transcript_435715.p1 ORF type:3prime_partial len:189 (-),score=38.50 R_Transcript_435715:1-564(-)
ATGTCTAATGTCAGGGAGAAATTCAGTACCACAGCTGAGCAAGATTCAACTAACACGCGAAACACTTACAATAATAGCTCAAAATCGAAGCAAGACACCATTGAAGGCACAAGTAATTCCCATAAGCCCTCTGAGAGAATCAATCGTCAAGACGACCAGAACAATATTCAAAGCTCTAGTACAGAGACGACGAACGACAATGGACCCACAACATCAAGTTCCTCGTCCAGTCAGGTGGCAGAACAACCAACAACCACTATTCCTCAGCAGGAAAACAACATTGAGAGCTCAGTGCAGCAGAATCCGATGGATGTCTTTCGAGAGGATGTTCCTTCTTCAGATGCTATATGGGAAGATGCCAGCGATGAAGATGTTGGTAACCTTGACATGGAAGGGGCAGGAGACACAGCCACATCATATAACGATTGGGAAGATGAAGAAGAGATAATGTCAGAAGACCAAGAATTCAGCAGTCAGCAGTACTTCGAGAGTAACCTTGACTGGATTAGTGACATTGCTCGCCCACGTAGCTACTGGGAAGATTGCAGGCAAGCTAGGTATCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_435715.p1 GENE.R_Transcript_435715~~R_Transcript_435715.p1 ORF type:3prime_partial len:189 (-),score=38.50 R_Transcript_435715:1-564(-)
MSNVREKFSTTAEQDSTNTRNTYNNSSKSKQDTIEGTSNSHKPSERINRQDDQNNIQSSSTETTNDNGPTTSSSSSSQVAEQPTTTIPQQENNIESSVQQNPMDVFREDVPSSDAIWEDASDEDVGNLDMEGAGDTATSYNDWEDEEEIMSEDQEFSSQQYFESNLDWISDIARPRSYWEDCRQARYQ

Click here to download the sequence:
Link to NCBI Protein BLAST