Transcript Information: R_Transcript_43613.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90795174560351
Replicate 21.152455597464
Replicate 31.0608609178321
Condition 2: 8 Hour
Replicate 10.29399837844034
Replicate 20.84380686193153
Replicate 30.71610127661904
Condition 3: 24 Hour
Replicate 11.535770980927
Replicate 20.68095138941748
Replicate 31.5017293095641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43613.p1 GENE.R_Transcript_43613~~R_Transcript_43613.p1 ORF type:complete len:583 (+),score=72.39,RVT_1|PF00078.23|1.3e-26,zf-RVT|PF13966.2|1.3e-14 R_Transcript_43613:3923-5671(+)
ATGCATTCCATGAATAAGAGGAAAGGTAGGAAGGGGTGGTTCGCTTTGAAGATTGACCTTGAGAAAGCCTATGATAGAATGGAATGGGATTTTATTAGAAACATGTTCTTCACCTTCAATTTTGACTCCCACTCTATTAGGCTTATCATGGAATGTATCACCACAATTAACACCTCAGTCCTGATCAATGGGGGGATCACTGAAACTTTTCAACCGTCTAGGGCCCTTAGACAAGGAGATCCCCTCTCTCCCTACATCTTCTTCCTGTGCATGGAGTTCCTCTCCAAGCTTATTCATAATGCTTGCGAGGATAAATCTTGGACCTCCTTCTCCTTTTCTCAGTCAGGTCTTGTGATCTCCCATTTATTGTTTGCTGACGATGTTATCCTCTTTGGGGAAGCAAACCTCAATACCCTGGAAGCAATGGAATCAACCCTGAACCTGTTTTGTCAAGATTCTGGGCAGAAAATCAATGCTAACAAGAGCAATCTCTTCTTCTCACCTAATACTTCCCCGGACATTATCCAAGCTTTTGAGGATACCCTAGGGACAAAATCAACCTTGGACCTAGGCACTTACCTTGGCCTTCCCCTTACAACCAAGAGACCTACCAAAAACCAACTGAGGGGGATTGTGAATAAGGTTAGAGATAGGCTTGCCTCTTGGAAGGCTAACTTCATTACCAGAGCTGGGAGGGTCTGTCTTATCAATGCCACCCTAAATGCGATCCCTACCTACTACATGCACTCTATTACTTTCCCTAAATGTATGTCTAATGAGTTAAAAAGGATTGTGAATAACTTTCTTTGGGGGGACTCTTTAGATAAGAGGAAACTCCATTTAGTTGGGTGGGAAGACATCACCAGACCTAAGGACCAAGGGGGGTTGGGAATTAGGGATCTTGTCCATCTTAATAAAGCTTTTATGGTCAAGTTAGGGTGGAAAACCTTCCTTCATGAGGATAACTTTGCTACCTTGGTACTTAAGGATAAGTACATCCATAACAGGCCTCACTCTATTGCTTTTAGGGCTGGCTCCCATGTCTGGCAGGACATAGGCAAAGGTTGGGACTTCCTTCAGGCCCATACCATTTGGTCAATAGGTCAAGGGGATAAGGTTCTTTTCAGGCTTGATAACTGGCTCCCTTGTGGGAAGCTTAGGAACCTTATTGAGGAGCCTTTAACCTTCCAGGACTCCTTACTCCGGGTGAAGGACAGCCTTACCAACAATGCTTGGGATCTTAGGGGGCTATCCTTTGAGTTACCTGAGGACATTCTTCAATGGATCCAGCTCACCCCTATACCCAACTCCTCCTCTCCAGATATTCTTTCTACTTCTCTCCTTAAGGATAGGAAATTCGATCTTGCTTCAACCTATGTTGGTCTCAAAGCATCCACTACTAGTGAGAAGCTCCTTACTTCCAAATGGATTTGGAAGAGCCTTACACTCCCAAAAATCCAATTCCTTCTCTGGCTTAGCGTTTTGGATAGACTACCTCACAAAGCTACTCTGGCCCGTAGAGGGATCATCCCTTTGGACACTTGCCATGCTTGTCCTGCTAGAGAGGATACATTCCATGTGCTTAGGGATTGTCATGTTGCTAGGAGCGTTTGGGATAAGTTCACCACCCCACCTGATTTTTTCAACCTTGACCTTCTCCAGTGGCTCAAACAAAATACCACAAATAAATCACTCACTCATCATACCCCCTGGGGCACTCTCTTTACCTTTATTGCATGGGGTATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43613.p1 GENE.R_Transcript_43613~~R_Transcript_43613.p1 ORF type:complete len:583 (+),score=72.39,RVT_1|PF00078.23|1.3e-26,zf-RVT|PF13966.2|1.3e-14 R_Transcript_43613:3923-5671(+)
MHSMNKRKGRKGWFALKIDLEKAYDRMEWDFIRNMFFTFNFDSHSIRLIMECITTINTSVLINGGITETFQPSRALRQGDPLSPYIFFLCMEFLSKLIHNACEDKSWTSFSFSQSGLVISHLLFADDVILFGEANLNTLEAMESTLNLFCQDSGQKINANKSNLFFSPNTSPDIIQAFEDTLGTKSTLDLGTYLGLPLTTKRPTKNQLRGIVNKVRDRLASWKANFITRAGRVCLINATLNAIPTYYMHSITFPKCMSNELKRIVNNFLWGDSLDKRKLHLVGWEDITRPKDQGGLGIRDLVHLNKAFMVKLGWKTFLHEDNFATLVLKDKYIHNRPHSIAFRAGSHVWQDIGKGWDFLQAHTIWSIGQGDKVLFRLDNWLPCGKLRNLIEEPLTFQDSLLRVKDSLTNNAWDLRGLSFELPEDILQWIQLTPIPNSSSPDILSTSLLKDRKFDLASTYVGLKASTTSEKLLTSKWIWKSLTLPKIQFLLWLSVLDRLPHKATLARRGIIPLDTCHACPAREDTFHVLRDCHVARSVWDKFTTPPDFFNLDLLQWLKQNTTNKSLTHHTPWGTLFTFIAWGI*

Click here to download the sequence:
Link to NCBI Protein BLAST