Transcript Information: R_Transcript_436294.p1


Annotated TAIR IDAT5G14250.1
Annotated Gene NameProteasome component (PCI) domain protein
Annotated Gene Symbol(s)COP13, CSN3, FUS11
Annotation TypeHomolog
Chromosome Positionchr5:4597970-4600561 | Forward length=429
E-Value7E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67376701510707
Replicate 20.49320168763116
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.075036516245589
Replicate 30.060911445034856
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.073448673445964


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_436294.p1 GENE.R_Transcript_436294~~R_Transcript_436294.p1 ORF type:5prime_partial len:298 (+),score=48.59,PCI|PF01399.23|3.6e-16,PCI|PF01399.23|1.1e+04 R_Transcript_436294:3-896(+)
GCAAGACAAGATGAGAACATGTTGACCCCAATTCACTCTGATTTCTTGCAATTGTGCATTCTCTCCAGATGCTACAACGCTGCACTTCCAGTTGTTAAATCCACCATCTTGTCCATCTCAAGAGGAAACTTCCATCACTCCCACTTTCTCAAATTCTACTATTATGGAGGTATCGTCTTGCTTGCAGTCAAACAATACGATAGTGCTCTCTTGTTCTTTGACAGAGTCATCAATGCTCGTGCAGTTGTCATCTCTGCCATCATGTTCGAGGCATACAAGAAATATATCCTTACCTCCTTGTTGGTCGACGGAAAGGTCTCTGGAGGAAAGAGCAGCATGGTCCAAAGACATCTCAAGGCTCTCACTCAACCTTATCACGAATTCGCAAACTCTTATGCTACCAAGAGCATCCAAGATATCAACAAATGCCTCGAGAAGCACGGTGAAACCTTTCTCAAGGACAGAAACTTGGGTCTCGTCAAGAAATGCATCTCCAATCTCTACAACAGCAACATCAAATCCTACACCAAAACCTATCTCACTCTCTCCTTGAAGGGTATCTCTGAGGGAACCAAAATCGAGAAGATCGAAGAAGTGGAAACCCGTCTCGTAAGAATGATTGAAACTGGAGATCTTCATGCAACTCTCAATGAAAAAGATGGAATTGTCTCCTTCTCTGAGGCTTCTGAAAAATATGATACCAGTGTCACTCTTAATCAATTGGATAATAACATCAAGACCTTGATCCGTTTGGGAGACATCATTAAATATCAAGATGACAAAAACGCTCTCAACTTCAACTACATCCAAAGAACCCAAATGCAAGAACAAAGATGGGATGAACAAGATGATATTGGAGGTTTGGGAGGAATGGGAGGAATGTTCCGTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_436294.p1 GENE.R_Transcript_436294~~R_Transcript_436294.p1 ORF type:5prime_partial len:298 (+),score=48.59,PCI|PF01399.23|3.6e-16,PCI|PF01399.23|1.1e+04 R_Transcript_436294:3-896(+)
ARQDENMLTPIHSDFLQLCILSRCYNAALPVVKSTILSISRGNFHHSHFLKFYYYGGIVLLAVKQYDSALLFFDRVINARAVVISAIMFEAYKKYILTSLLVDGKVSGGKSSMVQRHLKALTQPYHEFANSYATKSIQDINKCLEKHGETFLKDRNLGLVKKCISNLYNSNIKSYTKTYLTLSLKGISEGTKIEKIEEVETRLVRMIETGDLHATLNEKDGIVSFSEASEKYDTSVTLNQLDNNIKTLIRLGDIIKYQDDKNALNFNYIQRTQMQEQRWDEQDDIGGLGGMGGMFRG*

Click here to download the sequence:
Link to NCBI Protein BLAST