Transcript Information: R_Transcript_43656.p1


Annotated TAIR IDAT4G24580.1
Annotated Gene NameRho GTPase activation protein (RhoGAP) with PH domain
Annotated Gene Symbol(s)REN1
Annotation TypeHomolog
Chromosome Positionchr4:12687879-12694248 | Reverse length=933
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6225914838224
Replicate 22.0331987939081
Replicate 33.3602405102697
Condition 2: 8 Hour
Replicate 11.6668230213369
Replicate 21.7365593759694
Replicate 31.0441962005975
Condition 3: 24 Hour
Replicate 13.235664105918
Replicate 22.4106419113383
Replicate 32.665137579325


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43656.p1 GENE.R_Transcript_43656~~R_Transcript_43656.p1 ORF type:5prime_partial len:1043 (+),score=279.98,RhoGAP|PF00620.23|7.3e-28,Lzipper-MIP1|PF14389.2|1.1e+03,Lzipper-MIP1|PF14389.2|2.3e+03,Lzipper-MIP1|PF14389.2|5.1e-15,PH|PF00169.25|5.8e-10 R_Transcript_43656:1-3129(+)
TGGAAGAAAAGATGGTTTATTCTGACACGTACGTCTTTGGTCTTTTTCAGAAGCGATCCTAGTGCGGCTCCTCAAAAAGGAAATGAGATGAATCTAACCCTTGGTGGCATTGATCTCAACAACTCTGCGAGTGTCGAAGTGAAGGTGGACAAAAAGTTATTGACAGTGTTCTTTCCTGATGGTCGTGATGGACGTGCTTTCACACTCAAGGCTGAAACTTTGGAGGATCTACATGAATGGAAGACTGCACTGGAGAATGCCTTGGCCCAGGCACCAAGTGCGACTCATGCCGCTGGACAAAATGGGATTCTTAAAAGTGAGCAGGTGGATGGAGCTAATGGCTCTGCTGATCAACAGAAAGATAGGCCGCCTATCAAATCTATGGTCATTGGACGACCCATTTTACTTGCTTTGGAAGATATAGACGGATCACCTTCTTTCTTGGAGAAAGCTCTCAAATTCATTGAAGACTATGGAGTCAAGGTAGAAGGGATTTTACGACAAGCGGCTGATGTTGAAGAAGTTCACCGTCGTGTGCGCGAATATGAACAGGGTAAAACTGAGTTCTCTCCAGAAGAGGATCCACATGTCATTGCAGATTGTGTGAAGTACATCTTGAGAGAATTACCATCTTCTCCAGTTCCAGCATCTTGTTGTACTGCACTACTGGAAGCGTTTCGAAGTGACCGCAACAATAGGCTTAATGCCATGCGTACAGCAATACTAGAAACGTTTCCAGAGCCTAATAGACGGTTACTGCAAAGGATTCTCATGATGATGCAAAGTGTGGCTTCCCATAAATTGGAAAATCGGATGAGCGTATCAGCTGTGGCAGCTTGCATGTCCCCTTTGCTTCTACGCCCACTTCTTGCTGGTGATTGTGAACTTGAAAATACGCACATGGATGTCGCTGGTGATGGGTCTCTTCAATTACTTCAAGCAGCTGCAGCAGCAAACCACGCTCAGGCTATAATCATTACTCTACTAGAGGAGTATAACAACATATTTGGGGAAGGTTCAATGTCACCTGAATTATTCTCAGACTCAGATGAGAGCGGAAGTGGGACAGAGGAGGCTACTGATGATGATGACATGTATGAGGATGATGATGATGAGGAGGAGGAGGAGGGATCAGATGATGAGGAAGCATCAGATGACCATGATGCAGAAACAGATGATGATTATGAACATTCAGTAACTGAGACATGTAGTGACAGTGGTGACCATGAGGAGAGCAACTCTAATGATGACAAGCAAAGTGAAAGGTCCAGCTCATTTTCCAAGTCCCCAGAAAGAGTTGACCATTTAGCAAAGAGGTCGCCATCAGCTTCACCTCGTACATCAGCACCTCAAAACAATAATGTGAAGGGTAGTGATAATACAATGAAGCAAGTGAAAGATACTCCTATATCAGTGACCGAAATTGCTGACTCTACTAAATCGCATAGAGATATTCCAGCAGAGACGAGTTCAGTAAATGAAACAGTTAGTTTTAGTTCAGAATTAGGCAGTCAATTGTCCACAACTAAGTTCCTCGGGTGCTCACAAGCCAGACGTCCAAGGTGGGGACGAACATCGGCCAAGAAAAATCTTTCCATGGAATCCATTGACTTTTCAGTTGAAGATGATGAGGATGAAATTGAAAGGCTGGAGGCAGCAAAGATTGAGCTGCAAAATCGAATTGCAGAAGAGGCTAATGGAAATGCAAAACTGCAAGCAAGTTTGGAGAGACGAAAGAAGGCCTTACATGAGCGCCGATTGGCTCTTGAGAATGATGTGGCTAGGTTACAGGAACAGTTGCAGAAGGAAAGAGAATTACGGGCAGCTCTAGAATCTGGAATCAGCACCTCTCAAGTTCCTGGTGCAGCAGCTGTTGATGAAAAGATGAAGGCTGAGCTTGAGGAAATTGCTTTAGCAGAAGAGAATTTTAATAGCTTGAAACATAGGCTAGATGACCTTGGAGCAGAGCTTAATCGTCAACATGAAAGAAATAGAGCTCTCATGCAGGATAGATCCACAAGACTACAAGAAACCTCAAGTCAAGGAACAATGCCGCTAATTAATAAGGACAAAGAGACCAAAGATAATTTATATCAAGTTGAAAGGTCAAGTAGAATCGAGGGACAAAGGAATTATCACATGGATGGAGCTGATCGTGATAATGATTGGAAAAACGAAACATCATCTTTGTCAAACAAAAGTCAAAACCAGACAAATGATACAGCACGAGCTGGCAGTTCCAAATTTGCATGGCTTCAAAGCAATTCATCTTCATCACCATCCCAGGAAGCCTCTGTTCCCAAACCTATGTCTTCTGCATCCAGGAAGTCCGGTAAGAGCGAGACAACTTCTGCACTGTCCAAATTGACAACCCGGCTCAACTTCTTGAAAGAGAGACGTAATCAAATTGCTAATGAGCTCCAAAACATAGATAAAGGCCGAGGATCACCAATTCCAAGCCCCGGGAAGGGCAAAGCTCCAGAACCTCTCCATATAGTGCACAACATAGACAAGACACAAGGTCAAGAGGGTAACTTTGTCCAGAACAAGGAAGACCTCTCTCATCAATTGTCTCATAGTTCCAGCAAGGGGACATCAACAGGGTTTGATAACGAGGATGGTAACAGAAGGGGCGACAACAAGGATGGTAACAGTAAGGGCGACAACAAGGATGGTAACAGAAAGGGCGACAACAAGGATGGTGACAACAAGGATGGTAACAGAAAGGGCGACAACAAGGATGGTAACAGAAAGAGCGACAACAAGGATGGTAATAAAAAGGGTGACAACAAGGATGGTAACAGAAAGGGCGACAACAAGGATGGGAAACATAAGGGAGATAACAAGGATGGTAAAAATAAAGGTGATAACAAGGATGGTAAACAAAAGGGCGATAACAAGGATGACAACAGAAAGGGTGACAACAAAGATGATAACAAGAAGGGTTCTAGTTCAAAGCCAGACATCCCATCAGCCCAAAATTTGGATCGAGGACGGAAGCCAGAAAACCAGTCAAATCAGCACCTTGACAGAATTAAGTCAGAAGGACAATCATCATCAAAAAATACAGACAGAGGACGAAAACAAGATGGCCAGTATTCGAATACCTCTAGAACGCTCTCCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43656.p1 GENE.R_Transcript_43656~~R_Transcript_43656.p1 ORF type:5prime_partial len:1043 (+),score=279.98,RhoGAP|PF00620.23|7.3e-28,Lzipper-MIP1|PF14389.2|1.1e+03,Lzipper-MIP1|PF14389.2|2.3e+03,Lzipper-MIP1|PF14389.2|5.1e-15,PH|PF00169.25|5.8e-10 R_Transcript_43656:1-3129(+)
WKKRWFILTRTSLVFFRSDPSAAPQKGNEMNLTLGGIDLNNSASVEVKVDKKLLTVFFPDGRDGRAFTLKAETLEDLHEWKTALENALAQAPSATHAAGQNGILKSEQVDGANGSADQQKDRPPIKSMVIGRPILLALEDIDGSPSFLEKALKFIEDYGVKVEGILRQAADVEEVHRRVREYEQGKTEFSPEEDPHVIADCVKYILRELPSSPVPASCCTALLEAFRSDRNNRLNAMRTAILETFPEPNRRLLQRILMMMQSVASHKLENRMSVSAVAACMSPLLLRPLLAGDCELENTHMDVAGDGSLQLLQAAAAANHAQAIIITLLEEYNNIFGEGSMSPELFSDSDESGSGTEEATDDDDMYEDDDDEEEEEGSDDEEASDDHDAETDDDYEHSVTETCSDSGDHEESNSNDDKQSERSSSFSKSPERVDHLAKRSPSASPRTSAPQNNNVKGSDNTMKQVKDTPISVTEIADSTKSHRDIPAETSSVNETVSFSSELGSQLSTTKFLGCSQARRPRWGRTSAKKNLSMESIDFSVEDDEDEIERLEAAKIELQNRIAEEANGNAKLQASLERRKKALHERRLALENDVARLQEQLQKERELRAALESGISTSQVPGAAAVDEKMKAELEEIALAEENFNSLKHRLDDLGAELNRQHERNRALMQDRSTRLQETSSQGTMPLINKDKETKDNLYQVERSSRIEGQRNYHMDGADRDNDWKNETSSLSNKSQNQTNDTARAGSSKFAWLQSNSSSSPSQEASVPKPMSSASRKSGKSETTSALSKLTTRLNFLKERRNQIANELQNIDKGRGSPIPSPGKGKAPEPLHIVHNIDKTQGQEGNFVQNKEDLSHQLSHSSSKGTSTGFDNEDGNRRGDNKDGNSKGDNKDGNRKGDNKDGDNKDGNRKGDNKDGNRKSDNKDGNKKGDNKDGNRKGDNKDGKHKGDNKDGKNKGDNKDGKQKGDNKDDNRKGDNKDDNKKGSSSKPDIPSAQNLDRGRKPENQSNQHLDRIKSEGQSSSKNTDRGRKQDGQYSNTSRTLSR*

Click here to download the sequence:
Link to NCBI Protein BLAST