Transcript Information: R_Transcript_43659.p1


Annotated TAIR IDAT4G24580.1
Annotated Gene NameRho GTPase activation protein (RhoGAP) with PH domain
Annotated Gene Symbol(s)REN1
Annotation TypeOrtholog
Chromosome Positionchr4:12687879-12694248 | Reverse length=933
E-Value4.3E-293
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.555865694685
Replicate 21.6369257081313
Replicate 31.7858683157083
Condition 2: 8 Hour
Replicate 10.55996780544636
Replicate 20.44163903844337
Replicate 31.1321170865106
Condition 3: 24 Hour
Replicate 11.8375791647954
Replicate 21.0316909044449
Replicate 31.2968806311363


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43659.p1 GENE.R_Transcript_43659~~R_Transcript_43659.p1 ORF type:3prime_partial len:962 (+),score=249.55,RhoGAP|PF00620.23|6.5e-28,Lzipper-MIP1|PF14389.2|1e+03,Lzipper-MIP1|PF14389.2|2.1e+03,Lzipper-MIP1|PF14389.2|4.6e-15,Lzipper-MIP1|PF14389.2|1.6e+04,PH|PF00169.25|2e-12 R_Transcript_43659:210-3092(+)
ATGACGACCAAAACTAACGATTCTTCCTCCCAGCCACTATCTCAAGGAGAGAATGCTGGCATTGCTCCACCTCAATCAGGACCACCTGAGCATCAGACCTCTCGAAACCGCAATCAGGTTTTCAAGAGTGGCCCCCTATATCTATCATCCAAAGGAATTGGATGGACATCGTGGAAGAAAAGATGGTTTATTCTGACACGTACGTCTTTGGTCTTTTTCAGAAGCGATCCTAGTGCGGCTCCTCAAAAAGGAAATGAGATGAATCTAACCCTTGGTGGCATTGATCTCAACAACTCTGCGAGTGTCGAAGTGAAGGTGGACAAAAAGTTATTGACAGTGTTCTTTCCTGATGGTCGTGATGGACGTGCTTTCACACTCAAGGCTGAAACTTTGGAGGATCTACATGAATGGAAGACTGCACTGGAGAATGCCTTGGCCCAGGCACCAAGTGCGACTCATGCCGCTGGACAAAATGGGATTCTTAAAAGTGAGCAGGTGGATGGAGCTAATGGCTCTGCTGATCAACAGAAAGATAGGCCGCCTATCAAATCTATGGTCATTGGACGACCCATTTTACTTGCTTTGGAAGATATAGACGGATCACCTTCTTTCTTGGAGAAAGCTCTCAAATTCATTGAAGACTATGGAGTCAAGGTAGAAGGGATTTTACGACAAGCGGCTGATGTTGAAGAAGTTCACCGTCGTGTGCGCGAATATGAACAGGGTAAAACTGAGTTCTCTCCAGAAGAGGATCCACATGTCATTGCAGATTGTGTGAAGTACATCTTGAGAGAATTACCATCTTCTCCAGTTCCAGCATCTTGTTGTACTGCACTACTGGAAGCGTTTCGAAGTGACCGCAACAATAGGCTTAATGCCATGCGTACAGCAATACTAGAAACGTTTCCAGAGCCTAATAGACGGTTACTGCAAAGGATTCTCATGATGATGCAAAGTGTGGCTTCCCATAAATTGGAAAATCGGATGAGCGTATCAGCTGTGGCAGCTTGCATGTCCCCTTTGCTTCTACGCCCACTTCTTGCTGGTGATTGTGAACTTGAAAATACGCACATGGATGTCGCTGGTGATGGGTCTCTTCAATTACTTCAAGCAGCTGCAGCAGCAAACCACGCTCAGGCTATAATCATTACTCTACTAGAGGAGTATAACAACATATTTGGGGAAGGTTCAATGTCACCTGAATTATTCTCAGACTCAGATGAGAGCGGAAGTGGGACAGAGGAGGCTACTGATGATGATGACATGTATGAGGATGATGATGATGAGGAGGAGGAGGAGGGATCAGATGATGAGGAAGCATCAGATGACCATGATGCAGAAACAGATGATGATTATGAACATTCAGTAACTGAGACATGTAGTGACAGTGGTGACCATGAGGAGAGCAACTCTAATGATGACAAGCAAAGTGAAAGGTCCAGCTCATTTTCCAAGTCCCCAGAAAGAGTTGACCATTTAGCAAAGAGGTCGCCATCAGCTTCACCTCGTACATCAGCACCTCAAAACAATAATGTGAAGGGTAGTGATAATACAATGAAGCAAGTGAAAGATACTCCTATATCAGTGACCGAAATTGCTGACTCTACTAAATCGCATAGAGATATTCCAGCAGAGACGAGTTCAGTAAATGAAACAGTTAGTTTTAGTTCAGAATTAGGCAGTCAATTGTCCACAACTAAGTTCCTCGGGTGCTCACAAGCCAGACGTCCAAGGTGGGGACGAACATCGGCCAAGAAAAATCTTTCCATGGAATCCATTGACTTTTCAGTTGAAGATGATGAGGATGAAATTGAAAGGCTGGAGGCAGCAAAGATTGAGCTGCAAAATCGAATTGCAGAAGAGGCTAATGGAAATGCAAAACTGCAAGCAAGTTTGGAGAGACGAAAGAAGGCCTTACATGAGCGCCGATTGGCTCTTGAGAATGATGTGGCTAGGTTACAGGAACAGTTGCAGAAGGAAAGAGAATTACGGGCAGCTCTAGAATCTGGAATCAGCACCTCTCAAGTTCCTGGTGCAGCAGCTGTTGATGAAAAGATGAAGGCTGAGCTTGAGGAAATTGCTTTAGCAGAAGAGAATTTTAATAGCTTGAAACATAGGCTAGATGACCTTGGAGCAGAGCTTAATCGTCAACATGAAAGAAATAGAGCTCTCATGCAGGATAGATCCACAAGACTACAAGAAACCTCAAGTCAAGGAACAATGCCGCTAATTAATAAGGACAAAGAGACCAAAGATAATTTATATCAAGTTGAAAGGTCAAGTAGAATCGAGGGACAAAGGAATTATCACATGGATGGAGCTGATCGTGATAATGATTGGAAAAACGAAACATCATCTTTGTCAAACAAAAGTCAAAACCAGACAAATGATACAGCACGAGCTGGCAGTTCCAAATTTGCATGGCTTCAAAGCAATTCATCTTCATCACCATCCCAGGAAGCCTCTGTTCCCAAACCTATGTCTTCTGCATCCAGGAAGTCCGGTAAGAGCGAGACAACTTCTGCACTGTCCAAATTGACAACCCGGCTCAACTTCTTGAAAGAGAGACGTAATCAAATTGCTAATGAGCTCCAAAACATAGATAAAGGCCGAGGATCACCAATTCCAAGCCCCGGGAAGGGCAAAGCTCCAGAACCTCTCCATATAGTGCACAACATAGACAAGACACAAGGTCAAGAGGGTAACTTTGTCCAGAACAAGGAAGACCTCTCTCATCAATTGTCTCATAGTTCCAGCAAGGGGACATCAACAGGGTTTGATAACGAGGATGGTAACAGAAGGGGCGACAACAAGGATGGTAACAGTAAGGGAGACAACAAGGATGTTAACAGAAAGGGCGATAACAAGGATGGTAACAGAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43659.p1 GENE.R_Transcript_43659~~R_Transcript_43659.p1 ORF type:3prime_partial len:962 (+),score=249.55,RhoGAP|PF00620.23|6.5e-28,Lzipper-MIP1|PF14389.2|1e+03,Lzipper-MIP1|PF14389.2|2.1e+03,Lzipper-MIP1|PF14389.2|4.6e-15,Lzipper-MIP1|PF14389.2|1.6e+04,PH|PF00169.25|2e-12 R_Transcript_43659:210-3092(+)
MTTKTNDSSSQPLSQGENAGIAPPQSGPPEHQTSRNRNQVFKSGPLYLSSKGIGWTSWKKRWFILTRTSLVFFRSDPSAAPQKGNEMNLTLGGIDLNNSASVEVKVDKKLLTVFFPDGRDGRAFTLKAETLEDLHEWKTALENALAQAPSATHAAGQNGILKSEQVDGANGSADQQKDRPPIKSMVIGRPILLALEDIDGSPSFLEKALKFIEDYGVKVEGILRQAADVEEVHRRVREYEQGKTEFSPEEDPHVIADCVKYILRELPSSPVPASCCTALLEAFRSDRNNRLNAMRTAILETFPEPNRRLLQRILMMMQSVASHKLENRMSVSAVAACMSPLLLRPLLAGDCELENTHMDVAGDGSLQLLQAAAAANHAQAIIITLLEEYNNIFGEGSMSPELFSDSDESGSGTEEATDDDDMYEDDDDEEEEEGSDDEEASDDHDAETDDDYEHSVTETCSDSGDHEESNSNDDKQSERSSSFSKSPERVDHLAKRSPSASPRTSAPQNNNVKGSDNTMKQVKDTPISVTEIADSTKSHRDIPAETSSVNETVSFSSELGSQLSTTKFLGCSQARRPRWGRTSAKKNLSMESIDFSVEDDEDEIERLEAAKIELQNRIAEEANGNAKLQASLERRKKALHERRLALENDVARLQEQLQKERELRAALESGISTSQVPGAAAVDEKMKAELEEIALAEENFNSLKHRLDDLGAELNRQHERNRALMQDRSTRLQETSSQGTMPLINKDKETKDNLYQVERSSRIEGQRNYHMDGADRDNDWKNETSSLSNKSQNQTNDTARAGSSKFAWLQSNSSSSPSQEASVPKPMSSASRKSGKSETTSALSKLTTRLNFLKERRNQIANELQNIDKGRGSPIPSPGKGKAPEPLHIVHNIDKTQGQEGNFVQNKEDLSHQLSHSSSKGTSTGFDNEDGNRRGDNKDGNSKGDNKDVNRKGDNKDGNRK

Click here to download the sequence:
Link to NCBI Protein BLAST