Transcript Information: R_Transcript_43664.p1


Annotated TAIR IDAT2G39170.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16334726-16335421 | Reverse length=231
E-Value6E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.924379601805
Replicate 29.4253465372433
Replicate 39.7813441560213
Condition 2: 8 Hour
Replicate 19.4726338847007
Replicate 27.9976876658255
Replicate 311.924415736021
Condition 3: 24 Hour
Replicate 19.4680007909875
Replicate 27.7273899762607
Replicate 39.9053846028294


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43664.p1 GENE.R_Transcript_43664~~R_Transcript_43664.p1 ORF type:complete len:274 (+),score=50.66,NEP|PF10167.5|1.7e-27 R_Transcript_43664:168-989(+)
ATGTGTGAGCTCTCTACTGCTGATGGCTTTGTGGAGATAAATGAAAGCTTAGGAGACATGATAAAGTACGTGGCAAACGAACCCTCGGTAGGATTGTACTACATCCAGCAGCATGCTCAGAATGCAGTGCCCAATGTCATCAGGCTCAAGAACAATATCAAGGAGAAGTCACATGAAGTGAGTTTGCAAACTGAAGATCTCGACGACTCGATTGCCATGACGAGGTCGATGAAAGAATGTGGGTTTCCCATCATTGATGAGATGATTAGAGATATAAAGTCATCTCTAAACATAATGTCGACTAAACAACCAATCAGAGGAGTGATCCAACATCGGAATTCAAGCTATCAGATGGGTGGGTCCAGCTCATGGGGCCCAGTTACATGGGCTCGCAGTGCAGTTAGTGTCCATGATGACAGTGTGAAAGGAGGAAGTTACTTTTCCAATGTGTTCAAATCCGCCAAAGAAAAAGCCGGGAATCTAAAGTGTCCGCAACTTGATCCGAAGGACTTGAAAGAGACGTTGGGAGGAGATTTGTCGAGCTGTGATGATCGACGACTATTAGCACCTGAAAGCAATAGTTTCACTCAGGCAGACGAAGCCGATGAACTGCCAGTATCTAGCCAGGTCGAAGACGAGATGGCAGATGACAGTAATTTAAACACAGATGGGAAAGTACAACCTGTGTTATCGGCTTCGAATGACTTTGATGAGTTCAAGGCTGATAAAGAAGCAAGACTAGAGGAGTGGTTAAAAGGCTCTGGCAGCATTCCTGAGAAAGAAACTGAGGATACAGGAGTTGATCAGCTTGACAGTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43664.p1 GENE.R_Transcript_43664~~R_Transcript_43664.p1 ORF type:complete len:274 (+),score=50.66,NEP|PF10167.5|1.7e-27 R_Transcript_43664:168-989(+)
MCELSTADGFVEINESLGDMIKYVANEPSVGLYYIQQHAQNAVPNVIRLKNNIKEKSHEVSLQTEDLDDSIAMTRSMKECGFPIIDEMIRDIKSSLNIMSTKQPIRGVIQHRNSSYQMGGSSSWGPVTWARSAVSVHDDSVKGGSYFSNVFKSAKEKAGNLKCPQLDPKDLKETLGGDLSSCDDRRLLAPESNSFTQADEADELPVSSQVEDEMADDSNLNTDGKVQPVLSASNDFDEFKADKEARLEEWLKGSGSIPEKETEDTGVDQLDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST