Transcript Information: R_Transcript_43678.p1


Annotated TAIR IDAT2G19270.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC, C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8360349-8361907 | Reverse length=359
E-Value5.2E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.799404760287
Replicate 224.794080853355
Replicate 324.268119933908
Condition 2: 8 Hour
Replicate 128.408665016313
Replicate 232.241271491942
Replicate 331.941206285487
Condition 3: 24 Hour
Replicate 127.584962172823
Replicate 227.697301862585
Replicate 328.504917731773


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43678.p1 GENE.R_Transcript_43678~~R_Transcript_43678.p1 ORF type:complete len:387 (+),score=99.12,PRCC|PF10253.5|2.1e-07 R_Transcript_43678:97-1257(+)
ATGGATTCCCTTCTAGCAAGCTACGCCTCTTCAGACGAAGAAGACGACCAACCCACCAACACCTCCTCCGCCGCTACCACCACCACCGCCCCCACAACCACCCAATCAAACACTCCTTCTCAACAGCAACCACCCTCAAACCCATCCTCTCTTTTCTCTTCCCTCCCAAAACCCCAATCCTCATCTTCATCATCCTCATCCTTATTCTCTTCTCTCCCACCTCCCAAACCCTCTCAACAAACCAAACAACAAGATTCAAAACCCATCTCAAAGACCCCATCTTTATTCTCCTCAATGCCACCTCCCACATCCCAAACGCCATCATCTGATACTATCCCTATCCTTCCTCCCAAAAGGGTCATTCAATTCAGACCCCCTCCCCCCAAATTTGATTCCAAACTTGCTGATAATGACGATGAAGATGAAGAAGAAGATGAAGGGGAAAGAGAGAGAAAGAAAAATAAACAACTGGGTGGTCAAGACACTTCTGTCAAATCCTTCCTTTCTAGCATGCCTACCCCTAAAAACTCCTCTAGCTCCACCCTTGGTGCCCTTCCCACCTCAGGCTCGGGCCGTCGGTCTGTTATAGAGACCGAGGGGACGGAGGGGCCCTCCCCCTCAAGTTCTGAAGCGGGGTTGGAGTCTAATAATGTTGTGAGTGGTCAGGATGATTGGGTTGATGGGTCACATTCATATAGTTATGATGAGGTGGGTTTTGCAGGTCATCATCAAGGTTATGCTGGTTATGAGGGTTATGGAAGTTATGCAAGTGCTGAGGGTTATGGTGGTTATGGCAGTGCTGGTTGGTATGAGGCATCATCTGGGGTGACAGTTCCTGAGACATCAGGAATGGTTGAGAGTGTTGTTAGTGTGGGTGGGAAGAGGAGAAAAGACCAAGTACCAACTGAAATAGTTGAGGTAAAGCAGGACGAATTGATGATGAATCGCCCTAGGGAGGATAAATCCAAGTTAACTGGCATGGCTTTTGGTCCTTCTTACCAGCCGGTCTCGACAAAGGGGAAACCATCCAAGCTCCACAAGCGAAAGCATCAAATTGGTGCATTGTACTTTGATATGAGGCAAAAGGAAACGGAACTTGCCGAACGACGTGCCAAAGGCTTAATGACTAAAGCTCAAACACAAGCAAAGTATGGATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43678.p1 GENE.R_Transcript_43678~~R_Transcript_43678.p1 ORF type:complete len:387 (+),score=99.12,PRCC|PF10253.5|2.1e-07 R_Transcript_43678:97-1257(+)
MDSLLASYASSDEEDDQPTNTSSAATTTTAPTTTQSNTPSQQQPPSNPSSLFSSLPKPQSSSSSSSSLFSSLPPPKPSQQTKQQDSKPISKTPSLFSSMPPPTSQTPSSDTIPILPPKRVIQFRPPPPKFDSKLADNDDEDEEEDEGERERKKNKQLGGQDTSVKSFLSSMPTPKNSSSSTLGALPTSGSGRRSVIETEGTEGPSPSSSEAGLESNNVVSGQDDWVDGSHSYSYDEVGFAGHHQGYAGYEGYGSYASAEGYGGYGSAGWYEASSGVTVPETSGMVESVVSVGGKRRKDQVPTEIVEVKQDELMMNRPREDKSKLTGMAFGPSYQPVSTKGKPSKLHKRKHQIGALYFDMRQKETELAERRAKGLMTKAQTQAKYGW*

Click here to download the sequence:
Link to NCBI Protein BLAST