Transcript Information: R_Transcript_4368.p1


Annotated TAIR IDAT3G60380.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22316913-22319144 | Reverse length=743
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7993799433386
Replicate 22.2611400448321
Replicate 33.0115151525012
Condition 2: 8 Hour
Replicate 12.1917417575157
Replicate 21.9389855582566
Replicate 32.767168612059
Condition 3: 24 Hour
Replicate 13.6925144492112
Replicate 23.022958561226
Replicate 34.9897844251248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4368.p1 GENE.R_Transcript_4368~~R_Transcript_4368.p1 ORF type:5prime_partial len:715 (+),score=181.70,DUF761|PF05553.7|2.5e-09 R_Transcript_4368:1-2145(+)
GTAGCTCCATCTTCAGTTTCAGTACCTGACAAGGATTTCGTTTCCCCTGTTAAACCATCAAGGTCTAGAAGATTCAGTCACGACAATGGGAATCTGAGTAAATTGCCAAACGTAAAGAGTGGTGTCAAGTCTTCAGCTGCACCTGATCATTCAGTGTCAGGTCAGAATGATTTCATCACTGATGTAAGTGAAAATGCTAGTAAGGAAAATCCGAAACTTTTCGTGGCTTCAACTGGAGCTCCTGATGATTGTTCTTTAAGGTCAAGAAAGCACAATCACGCGAATGTGAATTTGTGCGAACCATCAAACTTAGAGGTTGAGACTTCAGGCGGGAACAAAGCCAACTTTGTCATGCCTTCAGCTGTAGCTCCATCTTCAGTTTCAGTACCTGACAAGGATTTCGTTTCCCCTGTTAAACCATCAAGGTCTAGAAGATTCAGTCACGACAATGGGAATCTGAGTAAATTGCCAAACGTAAAGAGTGGTGTCAAGTCTTCAGCTGCACCTGATCATTCAGTGTCAGGTCAGAATGATTTCATCACTGATGTAAGTGAAAATGCTAGTAAGGAAAATCCGAAACTTTTCGTGGCTTCAACTGGAGCTCCTGATGATTGTTCTTTAAGGTCAAGAAAGCACAATCACGCGAATGTGAATTTGTGCGAACCATCAAACTTAGAGGTTGAGACTTCAGGCGGGAACAAAGCCAACTTTGTCATGCCTTCAGCTGTAGCTCCATCTTCAGTTTCAGTCCCTGACAAGGATTTTGGTTCATCAGTTAAACCATCAAGGTCTCGAAGATTCAGTCATGACAATGGGAATTCGGGTAAATCAACAAACATTGAAAGCGAAAATTTGGGTGGAGAAAGAACCAATTCTGTCAAGCCTTCAGCTGCATGTCAACATTCTATGTCAGGCCCTGAAAATGCTTGTGCTTCATCAATTAAAAGGTCAATGTCTCGAAGAACCAATCGAGGGACTGCTCTTAAGAAGGATGAAAAAGGGTTAGAGAAAGATAATGTGGGAAATGTTAGGAAGGCAAATGATTCTTCTACCCCTTATTTGTTTGATCCACTTTCAGCACCAACTTCAAGAGATGATCTTACTTCATCAGTAGATGGTTCTTTTTTGAAAAAGGATGAGCAAAGAAAAATCCCAACTAGATGGGATGATGATTGTTTTGTGATACCATTATCAGAAAATAATGATAATAATAATGATGTAGGAAACTTGGAGCAAGAAAATCTTTCTCATGGGCAGGTTGCTTCTTCAGAATCAGCTGGTTCAATCAGTAGAAGATCTAGTGATGAACTTTGTGAAGCGGAAGAACATGTTCCATCGAGGGTATCGACAAATAGCTGTGAGATAGAAGAATTGGGGAGAGACAATACGGATTCGTATAAACCTTCAACCCCATCACCACCACCACCAATTCAAACACGAAGAAATGATGTAGTCTCACCGGTTGAATCGAGCTCTAACACCCTAGTCAAAGGATCCTCGTTTAGTGAGGATGATGATGACCTAGGATCACCTCCTACACCTGAAAGGAGGAAAGCTTTGTCGAAGGCATCACATTCTCGACGTTTTAGCTGTGCATCTTTCTTTGATAGGGATCTTAAGAGGAGCGAGTCAAAGGAAGCAAACAAGAAGAGCAAGGGAGATCAGTATGCGAGAGGGAAATGCGGTTGGGATTGCTTGAAGTTGGATGTCAGACCAACTTTGGGTAAAGCGGCACTGAAAGGAAAGTCTGTGAGAACAATCAGGCCTCAAGAAACTCCTTCAGCAACGAATGGACACAGAAAAATTTCAGATGAAAGTGGAGTACCGAAGGGAAACAATCAGGAAATAATGGTTATACAGATTGGAATCACTGAAAAGCGATCAAATTCTAATGGTCGAAGAGGGGAGAAAAAGCAAGGAAGTGGTGGAACTTCTATCATATTGGGTTTGAACTCGAAGGAAAGCTCAAAGGGTAAAGTAGCTGCCCTTTGTGATGTTAAGGAGGAGGAAACTGATAACAACGAGATTGACAAGAAAGCAGATGAGTTCATAGCAAAGTTCAAGGAGCAGATTAGGCTTCAAAAGGTCAGTGCAGGGGCTGGATCGAGCAGGCAACATCATGCACGTCAGAATTCTTTGTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4368.p1 GENE.R_Transcript_4368~~R_Transcript_4368.p1 ORF type:5prime_partial len:715 (+),score=181.70,DUF761|PF05553.7|2.5e-09 R_Transcript_4368:1-2145(+)
VAPSSVSVPDKDFVSPVKPSRSRRFSHDNGNLSKLPNVKSGVKSSAAPDHSVSGQNDFITDVSENASKENPKLFVASTGAPDDCSLRSRKHNHANVNLCEPSNLEVETSGGNKANFVMPSAVAPSSVSVPDKDFVSPVKPSRSRRFSHDNGNLSKLPNVKSGVKSSAAPDHSVSGQNDFITDVSENASKENPKLFVASTGAPDDCSLRSRKHNHANVNLCEPSNLEVETSGGNKANFVMPSAVAPSSVSVPDKDFGSSVKPSRSRRFSHDNGNSGKSTNIESENLGGERTNSVKPSAACQHSMSGPENACASSIKRSMSRRTNRGTALKKDEKGLEKDNVGNVRKANDSSTPYLFDPLSAPTSRDDLTSSVDGSFLKKDEQRKIPTRWDDDCFVIPLSENNDNNNDVGNLEQENLSHGQVASSESAGSISRRSSDELCEAEEHVPSRVSTNSCEIEELGRDNTDSYKPSTPSPPPPIQTRRNDVVSPVESSSNTLVKGSSFSEDDDDLGSPPTPERRKALSKASHSRRFSCASFFDRDLKRSESKEANKKSKGDQYARGKCGWDCLKLDVRPTLGKAALKGKSVRTIRPQETPSATNGHRKISDESGVPKGNNQEIMVIQIGITEKRSNSNGRRGEKKQGSGGTSIILGLNSKESSKGKVAALCDVKEEETDNNEIDKKADEFIAKFKEQIRLQKVSAGAGSSRQHHARQNSLW*

Click here to download the sequence:
Link to NCBI Protein BLAST