Transcript Information: R_Transcript_436930.p1


Annotated TAIR IDAT5G13070.1
Annotated Gene NameMSF1-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4148216-4149062 | Forward length=183
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.39866393195503
Replicate 30.14497935187438
Condition 2: 8 Hour
Replicate 10.30994765756007
Replicate 20
Replicate 30.11488361152144
Condition 3: 24 Hour
Replicate 10.29060515478107
Replicate 20.13959024614289
Replicate 30.13852977649935


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_436930.p1 GENE.R_Transcript_436930~~R_Transcript_436930.p1 ORF type:5prime_partial len:158 (+),score=0.65,PRELI|PF04707.10|7.7e-32 R_Transcript_436930:1-474(+)
AGATATTTGGATGATGAAGGCTGTTTACACACAATTCGAGTTGTTTACTTGAAAGACAAACTTCCTAAAATTCTTCAACCCGTATTTGGAGGTGGTTATGGTATTTGTGTCGAACACGCCACAGTGGACCCAAAAAACAAGGTCATGACTATGAAAGCGCAAAACGTTTCATTTCAAAACATTTTTTCACTTCGAGAAACATGCACCTACAAAGTGGACCCAAACAACAGTAACCACACCGCTTTCGACCAAAAAGCGGAGATCATCGCGTTTCCGTTCGGACTCGTTAAAATCATCGAAAAGTTCTCTGCTGATAAAATTCGTTCAAACGCCAGCAAAGGACGCGAAATCATGGAAACCGCCATCCACAAAGTCATTCTCGAATCACGCGAAGCAATCGATAGCTTTGTTCGTGAGACGGAGGAGTGCATCGAATATCTCAGCATTCCCGACATTTCCACCAAAGAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_436930.p1 GENE.R_Transcript_436930~~R_Transcript_436930.p1 ORF type:5prime_partial len:158 (+),score=0.65,PRELI|PF04707.10|7.7e-32 R_Transcript_436930:1-474(+)
RYLDDEGCLHTIRVVYLKDKLPKILQPVFGGGYGICVEHATVDPKNKVMTMKAQNVSFQNIFSLRETCTYKVDPNNSNHTAFDQKAEIIAFPFGLVKIIEKFSADKIRSNASKGREIMETAIHKVILESREAIDSFVRETEECIEYLSIPDISTKEN*

Click here to download the sequence:
Link to NCBI Protein BLAST